Mirounga leonina (Southern elephant seal): 118024068
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Entry
118024068 CDS
T07472
Symbol
PRPF6
Name
(RefSeq) pre-mRNA-processing factor 6
KO
K12855
pre-mRNA-processing factor 6
Organism
mlx
Mirounga leonina (Southern elephant seal)
Pathway
mlx03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
mlx00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
118024068 (PRPF6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
mlx03041
]
118024068 (PRPF6)
Spliceosome [BR:
mlx03041
]
Complex B
U4/U6.U5 tri-snRNP components
U5 snRNP specific factors
118024068 (PRPF6)
Complex C
U5 SnRNP specific factors
118024068 (PRPF6)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PRP1_N
TPR_14
TPR_19
HAT_PRP39_N
TPR_16
Suf
HAT_PRP39_C
HAT_Syf1_CNRKL1_N
HAT_Syf1_CNRKL1_C
TPR_17
TPR_2
TPR_8
ARM_TT21_2nd
TPR_1
TPR_CcmH_CycH
ARM_TT21_C
T7SS_EccA1_N
TPR_21
Motif
Other DBs
NCBI-GeneID:
118024068
NCBI-ProteinID:
XP_034881510
LinkDB
All DBs
Position
Unknown
AA seq
941 aa
AA seq
DB search
MNKKKKPFLGMPAPLGYVPGLGRGATGFTTRSDIGPARDANDPVDDRHAPPGKRTVGDQM
KKSQAADDDDEDLNDTNYDEFNGYAGSLFSSGPYEKDDEEADAIYAALDKRMDERRKERR
EQREKEEIEKYRMERPKIQQQFSDLKRKLAEVTEEEWLSIPEVGDARNKRQRHPRYEKLT
PVPDSFFAKHLQTGENHTSVDPRQTQFGGLNTPYPGGLNTPYPGGMTPGLMTPGTGELDM
RKIGQARNTLMDMRLSQVSDSVSGQTVVDPKGYLTDLNSMIPTHGGDINDIKKARLLLKS
VRETNPHHPPAWIASARLEEVTGKLQVARNLIMKGTEMCPKSEDVWLEAARLQPGDTAKA
VVAQAVRHLPQSVRIYIRAAELETDIRAKKRVLRKALEHVPNSVRLWKAAVELEEPEDAR
IMLSRAVECCPTSVELWLALARLETYENARKVLNKARENIPTDRHIWITAAKLEEANGNT
QMVEKIIDRAITSLRANGVEINREQWIQDAEECDKAGSVATCQAVMRAVIGIGIEEEDRK
HTWMEDADSCVAHNALECARAIYAYALQVFPSKKSVWLRAAYFEKNHGTRESLEALLQRA
VAHCPKAEVLWLMGAKSKWLAGDVPAARSILALAFQANPNSEEIWLAAVKLESENNEYER
ARRLLAKARSSAPTARVFMKSVKLEWVLGNIAAAQELCEEALKHYEDFPKLWMMKGQIEE
QEELMEKAREAYNQGLKKCPHSTPLWLLLSRLEEKVGQLTRARAILEKSRLKNPKNPGLW
LESVRLEYRAGLKNIANTLMAKALQECPNSGVLWSEAIFLEARPQRKTKSVDALKKCEHD
PHVLLAVAKLFWSERKITKAREWFHRTVKIDSDLGDAWAFFYKFELQHGTEEQREEVRRR
CENAEPRHGELWCAVSKDIANWQRKIGEILVLVAAHIKNTF
NT seq
2826 nt
NT seq
+upstream
nt +downstream
nt
atgaacaagaagaagaagccgttcttgggcatgcccgcgccgctcggctacgtgccgggg
ctgggccggggtgccactggctttaccacccggtcagacattgggcccgcccgcgatgca
aatgaccctgtggatgaccgccatgcgcccccaggcaagaggaccgttggggaccaaatg
aagaaaagccaggctgcggatgatgatgacgaggatctgaatgacaccaactatgatgag
tttaatggctatgctgggagcctcttctcaagtgggccctatgaaaaggatgatgaggaa
gcagatgctatttatgcagctctggataaaaggatggatgaaagaagaaaagaaagaagg
gagcaaagggagaaagaagaaattgagaaataccgaatggaacgccccaaaatccaacag
cagttctcagatctcaaaaggaagttggcagaagtcaccgaagaagagtggctgagcatc
cctgaggttggcgatgccagaaacaaacgtcagcggcacccacgctatgagaagctgact
cctgttcctgacagtttctttgccaaacatctacagactggggagaaccatacttcagtg
gatccccggcaaactcaatttggaggtcttaacacaccctatccaggcgggctgaacacg
ccatacccaggtggaatgacacctggattgatgacacctggcacaggtgaactggacatg
aggaagataggacaagcaaggaacacgctgatggacatgaggctgagccaggtgtctgac
tcggtgagtggacagacggttgttgaccccaaaggctatctgacggatttaaactccatg
atcccaacccacggaggggatatcaatgacatcaagaaggcacggctcctccttaagtct
gttcgggagactaaccctcatcaccctccagcctggattgcgtcagcccgcctggaagaa
gtcaccgggaagctgcaggtagcacgaaaccttatcatgaaggggacagagatgtgcccc
aagagtgaagatgtctggctagaagcagccaggttgcagcctggggacacagccaaagct
gtggtagcccaagctgtccgtcacctcccacagtctgttaggatttacatcagagcagca
gagctggaaacagacattcgtgccaagaagcgggttctccggaaagcccttgaacatgtt
ccaaactctgttcgcttgtggaaggcggccgttgagctggaggagcctgaagatgctcga
atcatgctcagccgagctgtggagtgctgccccaccagtgtggagctctggcttgctctg
gcacggctagagacctatgaaaatgcccgcaaggtcttgaataaggcgcgtgagaacatc
cctacagaccggcacatctggatcacggctgccaagctggaggaagccaatgggaacaca
cagatggtagagaagatcattgaccgagccatcacctcactgcgggccaatggcgtggag
atcaaccgcgagcagtggatccaggatgccgaggagtgtgacaaggctgggagtgtggcc
acctgccaggctgtgatgcgtgctgtgattggcattgggattgaggaggaagatcggaag
cacacgtggatggaagatgctgacagttgtgtggcccataacgccctggagtgtgcacgc
gccatctatgcctacgccctgcaagtgttccccagcaagaagagcgtgtggctgcgagcc
gcgtacttcgagaagaaccacggcaccagggagtccctggaagcgctgctgcagagggcc
gtggcccattgccccaaagcggaggttctgtggcttatgggcgccaagtccaagtggctg
gcaggggacgtgcctgcagcgaggagcatcctggctctggccttccaggccaaccccaac
agcgaggagatctggttggccgctgtgaagctggagtcagagaacaacgagtatgagcga
gcccggcggctgctggccaaggcacggagcagtgcgcccactgcccgggtgttcatgaag
tctgtgaagctggagtgggtgctggggaacatcgcagcggcccaggagctgtgtgaagag
gccctgaagcactacgaggacttccccaagctgtggatgatgaaagggcagattgaggag
caggaggagctgatggagaaggcccgggaagcctacaaccaggggttgaagaaatgtccc
cactccacccctctgtggcttttgctttctcggctggaggagaaggttgggcagctgacc
cgagctcgggccattttggagaagtctcgcctgaagaacccgaagaaccctggcctgtgg
ttggagtctgtcaggctggagtaccgtgcagggctgaagaacattgccaacacgctcatg
gccaaggcgctgcaggagtgccccaactccggtgtcctgtggtctgaagccatcttcctt
gaggcaaggccccagaggaagaccaagagcgtcgatgccctgaagaagtgtgagcatgac
ccccatgtcctcctggctgtggccaagctgttctggagtgagcggaagatcaccaaggcc
agggagtggttccaccgcacggtcaagattgactcggacctgggggacgcctgggccttc
ttctacaagtttgagctgcagcatggcacagaggagcagcgggaggaggtgaggaggcgc
tgtgagaacgccgagccccggcacggggagctgtggtgtgctgtgtccaaggacatcgcc
aactggcagaggaagattggggagatccttgtgctggtggcggcccatatcaagaacacc
ttctga
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