Mirounga leonina (Southern elephant seal): 118024252
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Entry
118024252 CDS
T07472
Symbol
PCDH19
Name
(RefSeq) protocadherin-19 isoform X1
KO
K28837
protocadherin-19, delta 2
Organism
mlx
Mirounga leonina (Southern elephant seal)
Pathway
mlx04519
Cadherin signaling
Brite
KEGG Orthology (KO) [BR:
mlx00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04519 Cadherin signaling
118024252 (PCDH19)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
mlx04515
]
118024252 (PCDH19)
Cell adhesion molecules [BR:
mlx04515
]
Cadherins
Protocadherins
118024252 (PCDH19)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Ig_CLSTN
Cadherin_FAT4_N
Ig_Cad99C_N
Motif
Other DBs
NCBI-GeneID:
118024252
NCBI-ProteinID:
XP_034881920
LinkDB
All DBs
Position
Unknown
AA seq
1098 aa
AA seq
DB search
MESLLLPVLLLLAVLWTQAAALINLKYSVEEEQRAGTVIANVAKDAREAGFALDPRQASA
FRVVSNSAPHLVDINPSSGLLVTKQKIDRDLLCRQSPKCIISLEVMSSSMEICVIKVEIK
DLNDNAPSFPAAQIELEISEAASPGTRIPLDSAYDPDSGSFGVQTYELTPNELFGLEIKT
RGDGSRFAELVVEKSLDRETQSHYSFRITALDGGDPPHLGTVGLSIKVTDSNDNNPVFGE
STYAVSVPENSPPNTPVIRLNASDPDEGTNGQVVYSFYGYVNDRTRELFQIDPHSGLVTV
TGALDYEEGHVYELDVQAKDLGPNSIPAHCKVTVSVLDTNDNPPVINLLSVNSELVEVSE
SAPPGYVIALVRVSDRDSGLNGRVQCRLLGNVPFRLQEYESFSTILVDGRLDREQHDQYN
LTIQARDSGVPMLQSAKSFTVRITDENDNHPHFSKPYYQVMVQENNTPGAYLLSVSARDP
DLGLNGSVSYQIVPSQVRDMPVFTYVSINPNSGDIYALRSFNHEQTKAFEFKVLAKDGGL
PSLQSNATVRVIILDVNDNTPVITAPPLINGTAEVYIPRNSGIGYLVTVVKADDYDEGEN
GRVTYDMTEGDRGFFEIDQVNGEVRTTRTFGESSKASYELIVVAHDHGKTSLSASALVLI
YLSPALDAQESMGSVNLSLIFIIALGSIAGILFVTMIFVAIKCKRDNKEIRTYNCRIAEY
SYGHQKKSSKKKKISKNDIRLVPRDVEETDKMNVVSCSSLTSSLNYFDYHQQTLPLGCRR
SESTFLNVENQNTRNTSANHIYHHSFNSQGPQQPDLIINGVPLPETENYSFDSNYVNSRA
HLIKSSSTFKDLEGNSLKDSGHEESDQTDSEHDVQRSLYCDTAVNDVLNTSVTSMGSQMP
DHDQNEGFHCREECRILGHSDRCWMPRNPMPTRSKSPEHVRNVIALSIEATAADVEAYDD
CGPTKRTFATFGKDISDHPAEERPTLKGRRTVNVTICSPKVNGAIREAGNGCEAISPVTS
PLHLKSPLPTKPSVSYTIALAPPARDLEQYIHSGPSRPSEAEPRGADSEKVMHEVNPTLK
EGRDKESPGVKRLKDIVL
NT seq
3297 nt
NT seq
+upstream
nt +downstream
nt
atggaatcgctcctgctgccggtgctgctgctgttggccgtactgtggacgcaggcagcc
gccctcattaacctcaagtactccgtagaagaggagcagcgcgccgggacggtgatcgcc
aacgtggccaaggacgcgcgcgaggcgggctttgctctggatccacggcaggcctctgcc
ttccgtgtggtgtccaactcagccccgcacctggtggacattaaccccagttcgggcctg
cttgtcaccaagcagaagatcgaccgcgacttgctgtgccgccagagccccaagtgcatc
atctcgctcgaggtcatgtccagctcaatggagatatgtgtgattaaggtggagatcaag
gacctgaacgacaacgcgcccagcttcccagcggcacagatcgagctggagatctcagag
gcagctagtcctggcacgcgcatcccgctggacagcgcttatgacccggactcgggcagc
ttcggcgtgcagacttacgagctcacgcctaatgagctgtttggcctggagatcaagacg
cgcggcgatggctcacgctttgcggaacttgtggtggagaagagtctggatcgcgagaca
cagtcgcactacagctttcgcatcaccgcactcgacggcggcgacccaccgcatctgggc
actgttggcctcagcatcaaggtgaccgattccaatgacaacaacccggtgtttggcgag
tccacctacgcagtgagcgtgccagaaaactcacctcccaatacaccagtcatccgcctc
aatgccagcgacccagacgagggcaccaatggccaggtggtctactccttctacggctat
gtcaacgaccgcacgcgtgagctcttccagatcgacccacacagtggcctggtcacagtc
accggtgccctagactatgaagaaggccatgtgtacgaactggacgtgcaggccaaggac
ctggggcccaactccatcccggcacactgcaaggtgaccgtcagcgttctcgacaccaat
gacaacccgccggtcatcaacctgctgtcagttaacagcgagctggtggaggtaagcgag
agcgcccccccgggctacgtgattgcactggtgcgggtgtctgatcgagactcgggcctc
aatgggcgcgtgcagtgccgattgctgggcaacgtgccctttaggctgcaggagtatgag
agcttctccactatcctagtggacggacggctggaccgcgagcagcatgaccagtacaac
ctcacgatccaggcgcgcgacagcggtgtgcccatgctgcagagtgccaagtcctttaca
gttcgcatcaccgacgagaatgataaccacccgcacttttccaagccttactaccaggtc
atggtgcaggagaacaacacacctggcgcctacctgctttccgtgtctgcccgagacccc
gacctgggtctcaatggcagtgtctcctaccagattgtgccgtcgcaggtgcgggacatg
cctgtcttcacctatgtctccatcaaccccaactcgggcgacatctacgcgcttcgatcc
ttcaaccacgagcagaccaaggcattcgaattcaaggtcctggccaaggatggaggcctg
ccttcgctgcagagcaacgccacggttagggtcatcatcctcgacgtcaacgataatacc
ccggtcatcacggccccacccttgatcaacggcactgccgaggtctacatcccccgcaac
tctggcataggctatctggtgaccgtcgtcaaagcagacgactatgatgagggtgagaac
ggccgagtcacctacgacatgaccgagggcgaccgcggcttctttgaaatagatcaggtc
aatggcgaagtcagaaccactcgcacctttggcgagagctcaaaggcttcttatgagctt
attgtggtggcccacgaccacggcaagacgtctctctccgcctctgcactagtcctaatc
tacctgtcccctgctcttgacgcccaagagtcaatgggctcggtgaacttgtccctgatt
ttcattatcgccctgggctccattgccggcatcctctttgtcactatgatcttcgtggca
atcaagtgcaagcgagacaacaaagagatccggacctacaactgcagaatcgctgagtac
tcctatgggcatcaaaagaaatcaagcaagaagaaaaaaatcagtaagaatgacatccgt
ctagtaccccgggatgtggaggagacagacaagatgaacgttgtcagttgctcctccctg
acctcctccctcaactatttcgactaccaccagcagacactgcccctgggctgccgccgc
tctgagagcactttcctgaatgtggagaaccagaatacccgcaataccagcgccaaccac
atctatcatcactctttcaacagccagggtccccagcagccagacttgatcatcaatggt
gtgcctctgcctgagactgaaaactattcctttgattccaactatgtgaatagccgagcc
catttaatcaaaagcagctctaccttcaaggacttagagggcaacagcctgaaggatagt
ggccatgaagagagtgaccagactgacagtgagcatgatgtccagcggagcctgtattgt
gatactgctgtcaatgacgtgctgaacaccagtgtgacctccatgggatctcagatgcct
gaccatgatcagaatgaaggatttcattgcagggaagaatgtcggattcttggccactct
gacaggtgctggatgccccggaaccccatgcccacccgctccaagtcccctgagcacgtg
aggaacgtcatcgcgctgtccattgaagctactgctgctgatgttgaggcttatgacgac
tgtggccccaccaagcggacttttgcaacctttggaaaagatatcagtgaccacccggct
gaggagaggcccaccttgaaaggcaggagaactgtcaatgtgaccatctgcagccccaag
gtcaatggcgctatccgggaggcgggcaatggctgtgaggcgattagccctgtcacctcc
cccctgcacctcaagagccctctgcccaccaagccctccgtgtcttacaccattgccctg
gcgcccccggcccgtgatctggagcagtatatccacagtggcccatctcgtccctctgaa
gctgagccccgtggagctgacagcgagaaagtcatgcatgaggtcaaccccactctgaag
gagggtcgtgacaaagagtctcctggtgtgaagcgtctgaaggatattgttctctaa
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