Mirounga leonina (Southern elephant seal): 118024418
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Entry
118024418 CDS
T07472
Symbol
HELZ
Name
(RefSeq) probable helicase with zinc finger domain
KO
K25168
helicase with zinc finger domain [EC:5.6.2.-]
Organism
mlx
Mirounga leonina (Southern elephant seal)
Brite
KEGG Orthology (KO) [BR:
mlx00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mlx03019
]
118024418 (HELZ)
Messenger RNA biogenesis [BR:
mlx03019
]
Eukaryotic type
mRNA degradation factors
5'-3' decay
Other 5'-3' decay factors
118024418 (HELZ)
3'-5' decay
Other 3'-5' decay factors
118024418 (HELZ)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_11
AAA_12
zf-CCCH
UvrD-helicase
AAA_19
AAA_30
ResIII
PhoH
PAM2
zf_CCCH_4
Mov-10_helical
zf-CCCH_4
AAA_22
AAA_7
AAA_16
Bac_DnaA
Mg_chelatase
Flt3_lig
AAA_5
Motif
Other DBs
NCBI-GeneID:
118024418
NCBI-ProteinID:
XP_034882249
LinkDB
All DBs
Position
Unknown
AA seq
1876 aa
AA seq
DB search
MEDRRAEKSCEQACESLKRQDYEMTLKHCTEALLSLGRYSMADFTGPCPLEIESIKIESL
LYRIASFLQLKNYGQADEDCRHVLGEGLAKGDGAFQAVLCCMQLKGKLQLVSNILAKSLT
GESLNGMVTKDLTRLKTLLTETETATSNVLSGYHVEDLEGGSCNGWHFRPPPRGITSSEE
YTLCKRFLEQGICRYGAQCTSAHSQEELAEWQKRYASRLIKLKQQNENKQLSGSYMETLI
EKWMNSLSPEKVLSECIEGVKVEHNPDLSVTVNTKKSHQTWTFALTCKPARMLYRVALLY
DAHRPHFSIIAISAGDSTTQVSQEVPENCQEWIGGKMAQNGLDHYVYKVGIAFNTEIFGT
FRQTIVFDFGLEPVLMQRVMIDAASTEDLEYLMHAKQQLVTTAKRWDSSSKTIIDFEPNE
TTDLEKSLLIRYQIPLSADQLFTQSVLDKSLTKTNYQSRLHDLLYIEEIAQYKEVSKFNL
KVQLQILASFMLTGVSGGAKYAQNGQLFGRFKLTETLSEDTLAGRLVMTKVNAVYLLPVP
KEKLVQTQGTKEKVYEATIEEKTKEYIFLRISRECCEELNLRPDYDTQVELQFQLNRLPL
CEMHYALDRIKDNGVLFPDTTMTPTIPWSPNRQWDEQLDPRLNAKQKEAVLAITTPLSIQ
LPPVLIIGPYGTGKTFTLAQAVKHILQQQETSRILICTHSNSAADLYIKDYLHPYVEAGN
PQARPLRVYFRNRWVKTVHPVVHQYCLISSAHSTFQMPQKEDILKHRVVVVTLNTSQYLC
QLDLEPGFFTHILLDEAAQAMECETIMPLALATKNTRIVLAGDHMQLSPFVYSEFARERN
LHVSLLDRLYEHYPAEFPCRILLCENYRSHEAIINYTSELFYEGKLMASGKQPAHKDFYP
LTFFTARGEDVQEKNSTAFYNNAEVFEVVERVEELRRKWPVAWGKLDDGSIGVVTPYADQ
VFRIRAELRKKRLSDVNVERVLNVQGKLFCRKFWERFIALCHENNSLHGITFEQIKAQLE
ALELKKTYVLNPLAPEFIPRALRLQHSGNTNKLQQSPPKGKSLHHTQNDHFQNDGIVQPN
PSVLIGNPIRAYTPPPPLGPHPNLGKSPSPVQRIDPHTGTSILYVPAVYGGNVVMSVPLP
VPWTGYQGRFAVDPRILTHQAAMAYNMNLLQTHGRGSPIPYGLGHHPPVSIGQPQNPHQE
KEQHEPSRNGKSDTNNPGPEINKIRTPEKKPTESKQIDLESNPQNRSPESRPGVVYPNTK
FHRKDNLNPRHINLPLPSPHAQYAIPGRHFHPLPQLPRPPFPIPQQHSALLNQQQSNLPE
QPTQMPPQPNQVVPPQNPLNQLTQQPPPQLSPAYQAGPNSAFFNSAVPHRPQSPPAEAVI
PEQHPPPMLQEGHSPLRAIAQPGPLLPSHLNNFTDENPPGLPIGEALDRMHGGVALETLR
QQQQVRLQQWNEHHAYLSQGSIPYPHHHHPHPHLQHLPQPPVGLHQPPVRTDWKLPSSAE
DEAETTDSRFQDLIRELSNRDQSETRELAEMPPPQSRLLQYRQIQTRSPPAVPSPPSSTD
HSSHFSNFNDNSRDIEVANNPAFPQRLPPQIFSSPFSLPSEHLAPPPLKYLAPDGAWTFA
NLQQNHLMGPGFPYGLPPLPHRPPQNPFVQIQNHQHAIGQEPFHPLSSRTVSSSSLPSLE
EYEPRGPGRPLYQRRISSSSVQPCSEEVSTPQDSLAQCKELQDHNNQSSFNFSSPESWVN
TTSSTPYQNIPCNGSSRTAQPRELIVPPKTVKAPEDQLKSENLEVSSSFNYNVLQHLSQF
PPLMPNKQMVESANSSSQQGSGGSKPTMSYASALRAPPKPRPQPEQAKKSSDPLSLFQEL
SLGSSSGSNGFYSYFK
NT seq
5631 nt
NT seq
+upstream
nt +downstream
nt
atggaagacagaagagctgagaagtcatgtgaacaagcgtgcgaatcacttaagaggcag
gactatgaaatgaccctcaagcactgcacagaggccctcctttctcttggccggtactcc
atggccgacttcacagggccatgtccactggagatagaaagcatcaaaattgagagtctt
ctttacagaattgcctcatttttgcaactgaaaaactatgggcaagctgatgaagattgt
aggcatgtgctgggagaaggcctggccaagggagatggtgcctttcaggcagtgctttgc
tgcatgcaactgaaaggaaagcttcaactggtatccaacattcttgccaagtcactgaca
ggagagtccctgaatgggatggtaacaaaggatttgacaagactaaaaacacttctcaca
gaaacagagacagcaactagtaacgtcctctctggatatcacgtggaagacttggaaggg
ggatcttgtaatggttggcatttccgcccaccacctaggggaatcacaagcagcgaggaa
tatactttgtgtaaaagatttttagagcaaggaatctgtaggtatggtgcgcagtgtact
tcagcacattcccaggaagaactagcagaatggcagaaaagatacgcttcacgcttgata
aaattgaaacagcaaaatgagaataaacagctctcaggcagttacatggaaaccttgata
gaaaagtggatgaattcattgtctcctgagaaagtgcttagtgaatgtatagaaggagta
aaagtagagcataatcctgatctgtcggttactgtcaacaccaaaaaatctcaccagaca
tggacctttgctcttacttgtaagcctgcaagaatgctgtatcgtgtagccttgctttat
gatgctcatcgtcctcattttagtatcattgcaatatctgccggagatagtactacccag
gtatcacaagaagtcccagaaaactgtcaagaatggataggaggaaagatggcccaaaat
ggattagatcattacgtgtataaagtcgggatagcatttaacacagaaatttttggaact
tttcgccaaaccatagttttcgactttggattggaaccagtactcatgcaaagagtaatg
attgatgcagcttctacagaagatcttgaatacctgatgcatgcaaaacaacagctagta
accacagctaagcgttgggattcttcttctaagactattatagattttgaacctaatgaa
actactgatttggagaagagccttcttatcagataccaaattcctctctctgctgaccag
ctgtttacccagtccgttttagacaaatcattgaccaagaccaactatcagtcacggctg
catgaccttctttatattgaggagatagcccagtataaagaagttagcaagttcaacctt
aaagtgcagttgcagattctggcaagtttcatgctcactggagtttctggaggtgcaaag
tatgctcagaatggacaactttttggtcgctttaagcttactgaaacactttctgaagat
actttggctggacggctggtgatgaccaaagtcaatgctgtttatttattaccagtccct
aaagagaagttagtacagacccagggaaccaaagagaaggtttatgaagctactattgaa
gaaaaaacaaaagaatatatatttttaaggatatccagggaatgctgtgaagaacttaat
cttcggcctgattatgacacacaggttgaacttcagtttcaattaaatcgattacccctc
tgtgaaatgcattatgcgctagacaggatcaaggacaatggggttttgtttccagacacc
actatgactccaaccataccttggagtcccaacagacagtgggatgagcagttggatcct
cggctaaatgcaaaacagaaagaggctgttctggccattacaactccactttcaatacag
ctgcctcctgttctcatcattggaccctatgggacaggcaaaacattcactctagctcag
gccgtcaagcacatactccagcagcaggagacgagcaggatcctcatttgcacccattct
aatagtgctgctgacctctacataaaggattatttacatccatatgtagaagcaggcaat
ccccaggcaagacctctcagggtatatttcagaaatcgctgggtaaagactgtccaccca
gttgtgcatcagtactgtttgatctcgagcgcacattccacctttcagatgccacagaaa
gaagatattcttaaacaccgagtggttgttgttacattgaatacttcccagtacctctgt
cagttggaccttgaacctgggttttttacacacatcctgttagacgaagctgcccaggcc
atggagtgtgaaaccattatgcctctagcgttagcaactaaaaacactcggattgtcttg
gctggtgaccacatgcagctcagtccttttgtttacagcgagtttgccagggagagaaac
cttcatgtttcattacttgatcgactctatgagcattaccctgccgagtttccttgtagg
atcctcctatgtgagaactaccgctcccatgaagctatcatcaattacacctctgagctc
ttctatgagggcaaactgatggccagtggaaagcaaccagcacacaaggatttctaccca
ctaactttctttacagcacgaggggaagatgtacaagaaaaaaatagcacagctttttat
aataatgcagaggtgttcgaagtggtggaacgtgtggaagagttgagaaggaagtggcca
gtagcgtgggggaagttggatgatggcagtattggtgtggtgacgccatatgctgatcaa
gtgttcaggatacgtgctgaacttcgaaaaaagagattatctgatgttaatgtagaaagg
gtgctaaatgttcaaggtaagcttttctgtaggaaattttgggaacggtttattgccctg
tgtcatgaaaataatagcctacacggaatcacttttgaacagatcaaagctcagctagag
gctttagaactcaagaagacgtatgtgttgaatccgctggcacctgaatttatcccccgg
gctctaagactgcagcattcaggaaataccaacaaactgcagcagtcaccccccaagggg
aaaagcctccatcatacccagaatgatcatttccagaatgatggaattgttcagcccaat
ccttctgtacttattggcaatcctattagagcatatactcctccaccacctcttggacct
cacccaaatttggggaaatctccaagccctgttcaaagaatagatcctcacactgggaca
agtattctttacgtacctgctgtctatggagggaatgtagttatgtcggtgcctttacct
gtaccatggacagggtaccagggcagatttgcagtcgatcctcggatccttacacaccag
gcagcgatggcctacaatatgaacctcttacagacacacggacgggggtctcccatacca
tatggccttgggcaccacccgcctgtcagcatagggcagccacaaaaccctcatcaggag
aaggagcagcatgagccaagtcgaaatggtaaaagtgatacaaataaccctggacctgaa
attaataagattcgaacaccagagaaaaagcctacagaatcaaaacagattgatttggaa
tcaaatccacagaacagaagtcctgagtcgcgtcctggtgttgtttatcccaataccaaa
tttcatcgcaaagataatctcaacccgagacacataaatcttcccctcccttctccccat
gcacagtatgcaatccccggtcgtcattttcatccccttccccagctacccagaccaccg
tttccaattccgcaacagcactctgccttgctaaatcagcagcagagtaatttgcctgaa
caaccaactcagatgccaccccaaccaaatcaggtagtcccgccacagaatccgttgaac
cagctgactcagcagccacctcctcaactttctcctgcctatcaggcaggacccaacagc
gctttctttaatagtgcggttcctcaccgaccacagtcccctcctgcagaggctgtgatt
cctgagcagcatccccctcccatgctgcaagaaggccacagtcctctgcgagccatcgca
cagcccggccccctccttccttcacatctgaataacttcactgatgagaaccccccagga
ttgcctataggggaggctttagatcgtatgcacgggggtgtagctctagaaacactaagg
cagcagcagcaagtgcggttacagcagtggaacgagcatcacgcctatctcagtcagggc
agtattccgtacccacaccaccaccatcctcatcctcacctccagcatcttcctcagccg
cccgtcgggttacatcagccgccggtgagaacagactggaagctccccagcagtgccgaa
gatgaagcagaaacaacagactcaaggtttcaagacttaatcagagaactatctaatcgt
gatcaaagtgaaacacgggaactagctgaaatgccaccacctcaatcaagacttttgcaa
tatagacaaattcagactaggagcccaccagcagtcccatctcccccatccagcacagac
cacagtagccacttttctaactttaatgacaacagcagagacattgaagtagccaacaat
ccagcatttccacagcgcctaccgccccagatattcagctcgcctttttcgttgccatct
gaacaccttgcccctcctcccttgaaatacctggcacctgatggagcatggacttttgct
aacttacaacagaatcacctaatggggccgggttttccctatggcctacctccattgcct
cacaggccaccgcagaacccttttgtacaaatacagaatcatcaacatgctattggtcaa
gagccatttcacccattgtcatctcgaacagtatcttcttcttcgctccctagcttagaa
gagtatgaacccagaggacctggtcggcccttgtaccaaagaagaatctcatctagctca
gtccagccttgttctgaagaagtaagcactcctcaagacagtcttgctcagtgtaaagag
cttcaggaccataataaccaatcttctttcaacttttcatccccggagtcctgggtaaac
accacctcatctaccccctatcagaacattccgtgtaatggatccagcaggacagctcag
cccagagagttgatagttccacccaagaccgtcaaagcccctgaggatcagctgaagtct
gagaacctcgaggtgtccagttccttcaactataatgtgctgcagcacctcagccagttc
ccccctctcatgcccaacaagcagatggtggagtcggccaacagcagtagccagcagggc
tctgggggcagcaagcccaccatgtcctatgccagcgctttacgggcccctcccaagccc
aggccccagcctgagcaggccaagaagagcagcgaccccctgtctctattccaggaactt
agcctggggagctcatcaggcagcaatggcttttactcttattttaaataa
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integrated database retrieval system
