Mirounga leonina (Southern elephant seal): 118024669
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Entry
118024669 CDS
T07472
Symbol
BRIP1
Name
(RefSeq) Fanconi anemia group J protein
KO
K15362
fanconi anemia group J protein [EC:
5.6.2.3
]
Organism
mlx
Mirounga leonina (Southern elephant seal)
Pathway
mlx03440
Homologous recombination
mlx03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
mlx00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
118024669 (BRIP1)
03460 Fanconi anemia pathway
118024669 (BRIP1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mlx03400
]
118024669 (BRIP1)
Enzymes [BR:
mlx01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
118024669 (BRIP1)
DNA repair and recombination proteins [BR:
mlx03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-B complex
118024669 (BRIP1)
FA (Fanconi anemia) pathway
Downstream FA components
118024669 (BRIP1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD_2
Helicase_C_2
DEAD
ResIII
ARCH_RTEL1
DUF4769
Motif
Other DBs
NCBI-GeneID:
118024669
NCBI-ProteinID:
XP_034882573
LinkDB
All DBs
Position
Unknown
AA seq
1215 aa
AA seq
DB search
MSSVWSEYTIGGVKITFPYKAYPSQLAMMNSIVRGLNSKQHCLLESPTGSGKSLALLCSA
LAWQQSLSGKPVDESLNKKAEVPSSCCCVCHSKNFTNIDLNQGTSHHFNGPSTPPSERND
TSSACQDSPEKTTLAAKLSAKKQASIKRDENDDFQVEKKRIRPLETTQQIRKRHCFEKEV
HHLDAKVASGKTTKLNSPLGKINSFSPQNPPGHCSRCCCSTKQGSSQDSSNTTKKDHGGK
SKIPKIYFGTRTHKQIAQITRELRRTAYSGVPMTILSSRDHTCVHPEVVGNFNRKEKCME
LLDGKNGKSCYFYHGVHKISDQHTLQTLQGMCKAWDIEELVSLGKKLKACPYYTARELIE
DAHIIFCPYNYLLDAQIRESMDINLKEQIVILDEAHNIEDCARESASYSVTEVQLRFARD
ELDSMVNNNIRKKDHEPLRAVCYSLINWLEANSEHLMERDYESSCKIWSGSEMLLNLHKM
GITTATFPILQGHFSAVLQKEEKVLPMHGKEEARVVPIISASTQIMLKGLFMVFDYLFRQ
NSRFADDYKVAIQQTYSWINQIDTSDKDGFFALAKNKKRSRQKIAVHVLNFWCLNPAVAF
SDINGKVWTIVLTSGTLSPMKSFSSELGVTFTIQLEANHVINNSQVWVGTIGSGPKGRNL
CATFQHTETFEFQDEVGELLLSVCQTVSQGILCFLPSYKLLEKLKERWLYTGLWHNLELV
KTVIVEPQGGEKTDFDELLQVYYDAIKYKGEKDGALLVAVCRGKVSEGLDFSDDNARAVI
TIGIPFPNVKDLQVELKRQYNDQHSKLRGLLPGRQWYDIQAYRALNQALGRCIRHRNDWG
ALILVDDRFRSNPSRYISGLSKWVRQQIQHHSTFESALESLAEFSKKHQKVIDVSKEDRK
FIQDSESTLEVTHLKDNSLTYLSEAASHLAPENPGKGEAKMCVQEQQCPKITKSPSLPRG
IISRKERDDPVLLEESSQAVKAEKIVISRSTSPTFSKQTKRASWSSFNSLGHCLTGEILT
AAPKFRSPEDYTSSVSTFKTEKGCKTVLPLVDKCESSSLTVNASFGPCPQSESTISSIKM
DSNLLKRNDSKQLFCCEAALDPDTELCLVGEEAELSTSHRASETEAEDESIYFSPELYDP
MDTNEEKNDLVESDRDNRLANHSNCILVEDLFEIRTMKGVDSVQEMKAEDCTDTKLNGRM
HIKESKIDNIGSNVM
NT seq
3648 nt
NT seq
+upstream
nt +downstream
nt
atgtcttcagtttggtctgaatatacaattggtggggtgaagattacctttccttataaa
gcttacccatcacagcttgctatgatgaattctattgtcagaggattaaatagtaagcaa
cattgtttgttggagagcccaacaggaagtgggaaaagcttagccttactttgttctgct
ttagcatggcaacagtctcttagtgggaagccagtggatgaaagcttaaataaaaaagct
gaagtaccatcatcatgttgttgtgtatgccattcaaagaattttacaaacattgacttg
aaccaaggaacttcacatcatttcaacggtccaagtacaccaccttctgaaagaaatgac
acttcatcagcttgtcaagactctcctgaaaaaactacgctggctgcaaagctatctgcc
aagaaacaggcttccataaaaagagatgaaaatgatgattttcaagtagagaagaaaaga
attcgacccttagaaaccacacagcagattagaaagcgtcattgttttgaaaaggaggta
catcatttggatgcaaaagttgcttcaggaaagaccacaaaactcaactctccattagga
aagataaactccttttctccacaaaatccccctggtcactgttccaggtgttgttgttct
actaaacaaggaagcagtcaagattcctcaaataccactaagaaggatcatggggggaaa
tccaagatacccaaaatatattttgggacacgcacacacaaacagatagctcagattact
agagagctccggaggacagcgtactcaggggtcccaatgactattctttccagcagggat
catacttgtgtccatcctgaagtagtaggtaacttcaacagaaaggaaaagtgcatggaa
ttgctggatggaaaaaacggcaaatcctgctatttttatcatggtgtacataaaattagt
gatcaacacacattacagactcttcaaggaatgtgcaaagcctgggatatagaagaactt
gtcagcttggggaaaaaactaaaggcatgtccatattacacagcacgagaactaatagaa
gatgctcacataatattttgtccttacaactatcttctagatgcacaaataagggaaagt
atggatatcaatctaaaagaacagattgtcattttagatgaagctcataacattgaagac
tgtgctcgggagtcagcaagttacagtgtaacagaagttcagcttcggtttgctcgagat
gaactagatagtatggtcaataataatataaggaagaaagaccatgaacctctgcgagct
gtgtgctatagcctaattaattggttagaagcaaactctgaacatcttatggaaagggat
tatgaatcatcctgtaaaatatggagtggaagtgaaatgctcttaaatttacacaaaatg
ggcatcaccactgctacttttcccattttgcagggacatttttctgctgtccttcaaaaa
gaagaaaaagtcttaccaatgcatggtaaagaggaggcaagagtagtaccgattattagt
gcttcaactcaaataatgctcaaaggactttttatggtgtttgactatctttttaggcaa
aatagcagatttgccgatgattataaagttgctattcaacagacttattcttggataaat
cagattgatacttcagataaagatggattctttgctctggcaaaaaataagaaacgttca
agacagaaaattgcagttcatgtgctaaacttttggtgcttaaatccagctgtggccttt
tcagatattaatggcaaagtttggacaattgttttgacatctgggacattatcaccaatg
aaatccttctcatcagaacttggtgttacattcactatccaactggaggctaatcatgtc
attaataactcacaggtttgggtgggcaccattgggtcaggccccaagggtcggaatctc
tgtgctaccttccagcacacagaaacatttgagttccaggatgaagtgggcgaacttttg
ttatctgtgtgtcagactgtgagccaaggaattttgtgtttcttgccatcttacaagtta
ttagaaaagttaaaagaacgttggctctacactggtttatggcataatctagagttggtg
aagacagtcattgtagaacctcagggaggagaaaaaactgattttgatgaattactgcag
gtgtactatgatgcaatcaagtacaaaggagagaaagatggagccctcttggtagcagtt
tgtcgtggtaaagtgagtgagggtctggatttctcagatgacaatgcccgtgctgtcata
acaatagggattccttttccaaacgtgaaagatctacaggttgaactaaagcgacaatac
aatgatcagcactcaaaattgagaggtcttttacctggtcgtcagtggtatgatattcaa
gcatatagggccttaaaccaggccctaggtaggtgtattcgacacagaaatgattgggga
gctcttattctagtggatgatcgtttcaggagtaatcccagtcgatatatatctggactt
tctaaatgggtacggcagcagattcagcaccattcaacatttgaaagtgcactggagtcc
ttggctgaattttccaaaaaacaccagaaggtcattgatgtatccaaagaggacagaaag
tttatacaggacagtgagtctacacttgaagtgacccatttgaaggacaatagtttaact
tatttatcagaagcggcaagtcatctagcaccagaaaatcctgggaaaggtgaagcaaaa
atgtgtgtccaagaacaacagtgtcctaaaataactaaaagtccatctctaccaagaggt
atcatctccagaaaggaaagagatgatcctgtattattggaagagtcctcccaggcagtg
aaagcagaaaaaattgtgatttccaggtccacaagcccaaccttcagcaaacagacaaag
agagctagctggtctagctttaattctttgggacattgtcttactggtgaaattctgact
gcagcacctaagttcaggtcaccagaggactatacctctagtgtctccactttcaaaaca
gaaaagggatgtaaaacagttttgccactcgttgataaatgtgagtcctcatctctgacg
gtaaacgcatcatttggaccatgccctcaatcagaaagcactatttcttcaataaagatg
gattctaatcttcttaaaagaaatgattccaaacagctgttctgctgtgaagcagccctg
gatccggacactgaattgtgtctagttggtgaagaagctgaactttctacttcacataga
gcttctgaaacagaagcagaggatgaatctatctatttttcacctgagctttatgatcct
atggatacaaatgaagaaaagaatgatctagttgaaagtgatagagacaatagattggct
aatcattcaaattgcattttagttgaagatctttttgaaattagaactatgaaaggagtg
gattcagtccaagaaatgaaagctgaggattgcacagacacaaagttgaatggacgcatg
catattaaagaaagtaaaatcgataacattggtagtaatgtaatgtaa
DBGET
integrated database retrieval system
