Mirounga leonina (Southern elephant seal): 118024858
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Entry
118024858 CDS
T07472
Symbol
CASC3
Name
(RefSeq) protein CASC3 isoform X1
KO
K14323
protein CASC3
Organism
mlx
Mirounga leonina (Southern elephant seal)
Pathway
mlx03013
Nucleocytoplasmic transport
mlx03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
mlx00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
118024858 (CASC3)
03015 mRNA surveillance pathway
118024858 (CASC3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mlx03019
]
118024858 (CASC3)
Messenger RNA biogenesis [BR:
mlx03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
118024858 (CASC3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Btz
Motif
Other DBs
NCBI-GeneID:
118024858
NCBI-ProteinID:
XP_034882942
LinkDB
All DBs
Position
Unknown
AA seq
708 aa
AA seq
DB search
MADRRRQRASQDTEDEESGASGSDSGGSPARGGGSCSGSAGGGGSGSLPSQRGGRAGALH
LRRVESGGAKSAEESECESEDGIEGDAVLSDYESAEDSEGNFSQGEEGEYSEEENSKVEL
KSEANDAANSSAKEEKGEEKPDTKGTVTGERQSGDGQESTEPVENKVGKKGPKHLDDDED
RKNPAYIPRKGLFFEHDLRGQTQEEEVRPKGRQRKLWKDEGRWEHDKFREDEQAPKSRQE
LIALYGYDIRSAHNPDDIKPRRIRKPRFGSPPQRDPNWIIERPNKSHRHQGPGGTLPPRT
FINRNAAGTGRMSAPRNYSRSGGFKEGRAGFRPVEAGGQHGGRCGETVKHESSYRSRRLE
QTPVRDPCPEADAQVLGSPEKEEAASEIPAAAPDAAPPAPDRPVEKKSYSRARRTRIKAG
DAVKVAEEVPPPPEGLNPAPQVPETTPSPPAKTGNWEAPVDSTTSGLEQDVAQLNIAEQN
WSPGQPSFLQPRELRGMPNHIHMGAGPPPQFNRMEEMGVQGGRAKRYSSQRQRPVPEPPA
PPVHISIMEGHYYDPLQFQGPIYTHGDSPAPLPPQGMIVQPEMHLPHPGLHPHQTPAPLP
NPGLYPPPVSMSPGQPPPQQLLAPTYFSAPGVMNFGNPSYPYAPGALPPPPPPHLYPNTQ
APSQVYGGVTYYNPAQQQVQPKPSPPRRTPQPVTIKPPPPEVVSRGSS
NT seq
2127 nt
NT seq
+upstream
nt +downstream
nt
atggcggatcggcggcggcagcgcgcttcgcaggacacggaggacgaggagtctggtgct
tcgggctcagacagcggcggctccccggcgcggggcggcgggagctgcagcggtagcgct
ggaggcggtggcagcggctctctgccttcccagcgcggaggccgagctggggcccttcat
ctgcggcgggtggagagcgggggggctaagagcgccgaggagtcggaatgtgagagtgaa
gatggcatcgagggcgatgctgttctgtcggattatgaaagtgcagaagactctgaaggt
aacttttctcagggtgaagaaggggaatacagtgaagaggaaaactccaaagtagagctg
aaatcagaagccaatgatgctgctaattcttcagcaaaagaagagaagggagaagaaaag
cctgacaccaaaggcactgtgactggagagaggcagagtggggatggacaggagagcaca
gaacctgtggagaacaaagtgggtaaaaagggccctaagcatttggatgatgatgaagat
cggaagaacccagcctacatcccccggaaagggctcttctttgagcatgatcttcgaggg
caaacacaggaggaggaagtcagacccaaggggcgtcagcgaaagctatggaaggatgag
ggtcgctgggagcatgacaagttccgggaagatgaacaagctccaaagtcccgacaggag
ctcattgctctttatggctatgacatccgctcagctcacaatcctgatgacatcaaaccc
cgaagaatccggaaacccaggtttgggagccctccacagagagatccaaactggattatt
gagcggccaaacaagtcccatcgccaccagggtcctgggggcaccctaccaccaaggaca
tttatcaacaggaatgctgcagggactggccgaatgtctgctcccaggaattactctcga
tctgggggctttaaggaaggtcgtgctggttttaggcctgtggaggctggtgggcagcac
ggtggccgttgtggtgagactgttaaacatgaaagcagttaccgatcacggcgcctagag
cagactcccgtgagggacccatgtccagaagctgatgctcaagtgctcggcagtcctgag
aaggaggaggcggcctcagagataccagctgctgctcccgatgctgcaccaccagcccct
gacaggcctgttgagaagaaatcctactcccgggcaagaagaaccagaatcaaagctgga
gatgcagtcaaggttgcagaggaggtgccccctccacccgaagggctgaacccagcacct
caagtcccagaaacgactccttctccacctgctaagactggaaactgggaggctccagtg
gattctactacaagtggacttgagcaagatgtggcacaactaaatatagcagaacagaat
tggagtccagggcagccttcgttcctgcaaccacgtgagcttcggggtatgcccaaccac
atacacatgggagcaggacctccacctcagtttaaccggatggaagaaatgggtgtccag
ggtgggcgagccaaacgctattcatctcagcggcaaagacctgtgccagagccccctgct
cctcctgtgcacatcagtatcatggagggacattactatgatccactgcagttccaggga
ccaatctatacccatggtgacagccctgccccactgcctcctcagggcatgattgtgcag
ccagaaatgcaccttccccacccaggtttacatccccaccagacaccggcacctctgccc
aatccgggcctctatcccccaccagtgtccatgtctccaggacagccaccacctcagcag
ttgcttgctcctacttacttttctgctccaggcgtcatgaactttggtaatcccagttac
ccttatgctccaggggcactgcctcccccaccgccgcctcatctgtatcctaatacgcag
gccccatcacaggtatatggaggagtgacctactataaccccgcccagcagcaggtgcag
ccaaagccctccccaccccggaggactccccagccagtcaccatcaagcccccaccacct
gaggttgtaagcaggggttccagttaa
DBGET
integrated database retrieval system
