Mirounga leonina (Southern elephant seal): 118024902
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Entry
118024902 CDS
T07472
Symbol
DHX58
Name
(RefSeq) probable ATP-dependent RNA helicase DHX58
KO
K12649
ATP-dependent RNA helicase DHX58 [EC:
5.6.2.6
]
Organism
mlx
Mirounga leonina (Southern elephant seal)
Pathway
mlx04622
RIG-I-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
mlx00001
]
09150 Organismal Systems
09151 Immune system
04622 RIG-I-like receptor signaling pathway
118024902 (DHX58)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
mlx04054
]
118024902 (DHX58)
Enzymes [BR:
mlx01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
118024902 (DHX58)
Pattern recognition receptors [BR:
mlx04054
]
Cytoplasmic pattern recognition receptors
RIG-I-like receptors
118024902 (DHX58)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RIG-I_C-RD
RIG-I_C
ResIII
Helicase_C
DEAD
SWI2_SNF2
AAA_19
AAA_22
Terminase_6N
Motif
Other DBs
NCBI-GeneID:
118024902
NCBI-ProteinID:
XP_034883011
LinkDB
All DBs
Position
Unknown
AA seq
678 aa
AA seq
DB search
MELRPYQWEVIMPALEGKNIIVWLPTGAGKTRAAAYVAKRHLETVDRAKVVVLVNRVHLV
SQHREEFSRMLDKCWAIITLSGDMGPRAGFGHLARSHDLIICTAELLQMALTSPEEEEHV
ELNAFSLLVVDECHHTHKDTVYNIILSRYLEHKLQRTRPLPQVLGLTASPGTGGASTLNG
AIDHILQLCANLDTWRIMSPQTYRPQLQEHSPQPCKQYNLCCRRSQDPFGDTLKKLMDRI
HNRLEMPELSQDYGTQNYEQQVVELSQAAAEAGLQQRRVYALHLRRYNDALLVHDTVRPV
DALDSLRDFYDRERAAKTQVLQAERWLLALFDDYKNELAHLATCSLENPKLEMLEQILRE
QFGSSDSARGIIFTQTRQSAHSLLLWLRQQPGLQTVDMRADLLIGAGNSSQNSHMTQRDQ
QEVIRKFRVGTLNLLVATSVAEEGLDIPQCNVVVRYGLLTNEISMVQARGRARAGQSIYS
FVATQGSRELRRELTNEVLETLMERAVATVQKMDQAEYQAKIRDLQRAAMVKRAARAAQR
ENQRQQFLAEQVQLLCVNCMVAVGHGSDLRKVEDAHHVNVNPNFSIYYTVSRGAVVIDRV
FKDWRPGGTIHCRNCGEAWGLQMIYKSVKLPALRVRSMLLETPRGRVQAKKWSRVPFPVA
DFDYLQHCAQNLADLSLD
NT seq
2037 nt
NT seq
+upstream
nt +downstream
nt
atggagctgcgaccctaccagtgggaggtgatcatgcctgccctggagggcaagaatatc
atcgtatggctgcccacgggggctgggaagacccgggcggctgcttatgtggccaagagg
catctagagactgtggaccgagccaaggtggttgtactggtcaaccgggtgcacctggta
agccagcatcgtgaggagttcagccgcatgctggacaaatgctgggccattataaccctg
agtggggacatggggccacgagctggctttggccacctggcccggagccatgatctgatc
atctgcacagctgagctgctacagatggcgctgaccagccccgaggaggaggagcacgtg
gagctcaatgccttctccctgctcgtggtggatgagtgtcaccacacgcacaaagacacc
gtctacaacatcatcctgagccggtacctagagcataaactccagaggacacggcccctg
ccccaggtgctgggtctcacagcctccccaggcactggtggggcctccacgcttaatggg
gccattgaccacatcctgcagctctgtgccaacctggacacgtggcgcatcatgtcaccg
cagacctaccgcccccagctgcaggagcacagccctcagccctgcaaacagtacaacctc
tgctgcaggcgcagtcaggacccgtttggggacacactgaagaagctcatggaccgaatc
cacaaccgcctggagatgcccgagttgagccaggactacgggacgcagaattacgagcag
caggtggtggagctgagccaggctgcggccgaggccggcctccagcagcgccgggtgtac
gctcttcacctgcggcgctacaacgatgcgctgctcgtccacgacacggtccgtcctgtg
gacgccctggactcgctgcgggatttctacgacagggagcgcgccgcgaagacccaggtt
ttgcaggccgagcgctggctgctggcgctgttcgatgattacaagaatgagctggcccac
ctggcaacatgcagcctggagaatccaaaactggagatgctagaacagatcctgcgggag
cagtttgggagcagcgacagcgcccggggcatcatcttcacccagacccgccagagcgct
cactctctcctgctttggctccggcagcagccgggcctgcagaccgtggacatgagggct
gacctgctgatcggcgcagggaacagtagccagaacagccatatgacccagagagaccag
caagaagtgatccggaagttccgggttggcaccctgaacctcctggtggccacaagtgtg
gcagaagagggactggacatcccccagtgcaacgtggtggtacgctatgggctcctgacc
aacgagatctccatggtccaggccaggggccgcgcccgggctggtcagagtatatactct
tttgtggcaacccaaggcagccgggagctgcggcgggagctgaccaatgaggtgctggag
acgctgatggagcgggccgtggctaccgtgcagaagatggaccaggccgagtaccaggcc
aagatccgggacctacagcgggcagctatggtcaagcgggcagcccgggcagcccagcgg
gagaatcagcggcagcagttcctggccgaacaggtgcagctcctctgtgtcaactgcatg
gtggccgtgggccacgggagcgacctgcggaaggtggaggatgcccaccacgtcaatgtg
aaccccaacttctcgatctactacactgtctcccgaggggctgtagtcattgacagagtc
ttcaaggactggaggcctgggggtaccattcactgcaggaactgtggggaggcctggggt
ctgcagatgatctacaagtcagtgaagctgccggcgctcagggtccgcagcatgcttcta
gagacaccccgagggagagtccaggccaagaagtggtcccgcgtgcccttcccagtggct
gacttcgactatctgcagcactgtgcccagaacctggccgacctctccctggactga
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