Mirounga leonina (Southern elephant seal): 118024954
Help
Entry
118024954 CDS
T07472
Symbol
DHX8
Name
(RefSeq) ATP-dependent RNA helicase DHX8 isoform X1
KO
K12818
ATP-dependent RNA helicase DHX8/PRP22 [EC:
5.6.2.6
]
Organism
mlx
Mirounga leonina (Southern elephant seal)
Pathway
mlx03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
mlx00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
118024954 (DHX8)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
mlx03041
]
118024954 (DHX8)
Enzymes [BR:
mlx01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
118024954 (DHX8)
Spliceosome [BR:
mlx03041
]
Complex C
Other components
Step II factors
118024954 (DHX8)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
S1
Helicase_C
HA2_N
DEAD
AAA_22
GIPC1_GH2
AAA_19
nSTAND3
Flavi_DEAD
AAA_16
T2SSE
TsaE
PhoH
Sigma54_activ_2
OB_RRP5_4th
ABC_tran
Motif
Other DBs
NCBI-GeneID:
118024954
NCBI-ProteinID:
XP_034883111
LinkDB
All DBs
Position
Unknown
AA seq
1224 aa
AA seq
DB search
MAVAVALAGAVPTTDLGPAEELAKLEYLSLVSKVCTELDNHLGINDKDLAEFVISLAEKN
TTFDTFKASLVKNGAEFTDSLISNLLRLIQTMRPPAKPSTSKDPVVKPKTGKEKLKELFP
VLCQPDNPSVRTMLDEDDVKVAVDVLKELEALMPSAAGQEKQRDAEHRDKTKKKKRSRSR
DRDRERDRERDRDRDRDRDRDHKRRHRSRSRSRSRTRERNKGKSRYRSRSRSQSPPKDRK
DRDKYGERNLDRWRDKHVDRPPPEEPAIGDIYNGKVTSIMQFGCFVQLEGLRKRWEGLVH
ISELRREGRVANVADVVSKGQRVKVKVLSFTGTKTSLSMKDVDQETGEDLNPNRRRNLVG
ETNEETSMRNPDRPTHLSLVSAPEVEDDSLERKRLTRISDPEKWEIKQMIAANVLSKEEF
PDFDEETGILPKVDDEEDEDLEIELVEEEPPFLRGHTKQSMDMSPIKIVKNPDGSLSQAA
MMQSALAKERRELKQAQREAEMDSIPMGLNKHWVDPLPDAEGRQIAANMRGIGMMPNDIP
EWKKHAFGGNKASYGKKTQMSIIEQRESLPIYKLKEQLVQAVHDNQILIVIGETGSGKTT
QITQYLAEAGYTSRGKIGCTQPRRVAAMSVAKRVSEEFGCCLGQEVGYTIRFEDCTSPET
VIKYMTDGMLLRECLIDPDLTQYAIIMLDEAHERTIHTDVLFGLLKKTVQKRQDMKLIVT
SATLDAVKFSQYFYEAPIFTIPGRTYPVEILYTKEPETDYLDASLITVMQIHLTEPPGDI
LVFLTGQEEIDTACEILYERMKSLGPDVPELIILPVYSALPSEMQTRIFDPAPPGSRKVV
IATNIAETSLTIDGIYYVVDPGFVKQKVYNSKTGIDQLVVTPISQAQAKQRAGRAGRTGP
GKCYRLYTERAYRDEMLTTNVPEIQRTNLASTVLSLKAMGINDLLSFDFMDAPPMETLIT
AMEQLYTLGALDDEGLLTRLGRRMAEFPLEPMLCKMLIMSVHLGCSEEMLTIVSMLSVQN
VFYRPKDKQALADQKKAKFHQTEGDHLTLLAVYNSWKNNKFSNPWCYENFIQARSLRRAQ
DIRKQMLGIMDRHKLDVVSCGKSTVRVQKAICSGFFRNAAKKDPQEGYRTLIDQQVVYIH
PSSALFNRQPEWVVYHELVLTTKEYMREVTTIDPRWLVEFAPAFFKVSDPTKLSKQKKQQ
RLEPLYNRYEEPNAWRISRAFRRR
NT seq
3675 nt
NT seq
+upstream
nt +downstream
nt
atggcggtggctgtggccctggcgggagccgtccccaccacggacctaggccccgcggaa
gaactcgccaaactcgagtatctgtctttagtgtcgaaagtttgcaccgagctggacaat
cacctggggatcaacgacaaggatctggctgaatttgtgatcagtcttgctgagaaaaat
accacctttgacacttttaaggcttctctggtcaaaaatggtgccgaattcacggattct
cttattagtaacttgctgcgcctcatacaaactatgcggcctccagcaaagccttctact
agtaaagatccagttgttaaacccaaaactggaaaagaaaagctgaaggaactcttccca
gtcctttgccagccagacaacccttctgtccggaccatgctggatgaggatgatgtgaaa
gtcgctgtggatgtcctgaaggaactggaggccttgatgcccagtgcagcgggccaggag
aagcagagagatgctgagcaccgggacaagacgaagaagaagaagcggagccggagccgg
gaccgggaccgagaacgtgaccgagagcgggaccgagacagagaccgagaccgtgataga
gaccacaagaggagacaccggtcccgctcccggtcacgttccaggacccgggagaggaat
aaagggaagtctaggtatcggtcaaggagcagaagtcagagtccccctaaagacaggaag
gaccgggacaagtatggggaaaggaatctggacagatggcgggataagcatgtggaccgc
cctcctccagaagagcctgccatcggagacatttacaatggcaaagttaccagcatcatg
cagtttggatgctttgtgcagctggagggattaaggaagcggtgggaaggcctggtgcac
atctctgagctccgtcgagaaggccgtgtggccaatgtggctgatgtggtgagcaaaggc
cagagggtgaaggtcaaagtactgtccttcactgggaccaagaccagtctgagcatgaag
gatgtggatcaagagactggagaagatctaaaccccaatcgacgacgaaatcttgttggg
gagaccaatgaggagacctccatgaggaatccagacagacctactcacctctccctcgtc
agtgcccctgaagtagaggatgattcactggagcgcaagcgccttacccgcatctctgac
ccggagaagtgggagatcaaacagatgattgctgccaatgtcctttccaaagaagagttt
ccggactttgatgaagagactggcattctccctaaagtggatgatgaagaagatgaagat
cttgagatcgaactggttgaggaagagcctccattcctgagagggcacaccaagcaaagc
atggacatgagccctattaaaattgttaagaacccggatggttccctctcccaagcagca
atgatgcagagtgccttagccaaagaaaggcgggaactcaagcaggcccagcgggaagca
gagatggattctattcccatggggctcaacaaacactgggttgatcctctgcctgatgcg
gaaggcaggcagattgctgccaatatgaggggtattgggatgatgcccaatgacattccc
gagtggaagaagcatgcctttgggggcaacaaagcttcttacgggaaaaagacccagatg
tcaatcattgagcagagagagagcctgcccatctacaaactgaaggagcagctggtccag
gctgtccatgacaatcaaatcctgattgttattggagagacaggatctgggaagacaacg
cagatcacccagtacctggcagaggcaggctacacgtcccggggcaagattggatgtacc
cagcccagaagagtagcagccatgtcggtggccaaaagagtatcagaggagtttggttgt
tgcttgggccaagaggtgggctacaccattcgatttgaggactgcaccagcccagagaca
gtgatcaagtacatgacagacgggatgctgcttcgggagtgcctgattgaccctgacctc
acgcagtacgcaatcatcatgttggacgaggcgcacgagagaaccattcacactgacgtg
ctcttcggattgttgaagaagacggttcagaaacggcaggacatgaagctgattgtcacc
tcagccacactggatgcagtgaagttttctcagtacttctatgaagcgcccatcttcacc
atcccaggtcgaacatacccagtggaaatactgtacacaaaggaacctgagacagattat
ctggacgccagcttgatcacggtcatgcagatccacttaacagaaccaccaggtgatatc
ctggtcttcctgactggtcaggaggagatcgataccgcttgcgagatcctctatgaaaga
atgaaatccctgggaccggatgttccagagctgatcatcctgccagtgtactctgctctt
cccagtgagatgcagacccgaatctttgacccggctccacctggcagcagaaaggtcgtg
attgccaccaacatcgcagagacctcactgactattgacggcatctactatgtggtggac
cctgggtttgtgaagcagaaagtttacaattccaagaccggcatcgaccagctcgtggtc
actccgatttctcaggctcaggcaaagcagcgagccggcagagccgggagaacgggccca
gggaagtgttacaggctgtacaccgaacgtgcctaccgagatgaaatgctgaccaccaac
gtgccggaaatccagaggaccaacctagcaagcacagtgctctcgctcaaggccatgggc
atcaatgacctgctgtcctttgacttcatggatgcgcctccaatggaaaccttgatcaca
gccatggagcagctgtacacgctgggggccttggatgacgagggcctgctcactcgcctg
ggccgcaggatggcagaattccctctggagccgatgctgtgcaaaatgctgatcatgtcc
gtgcatctgggctgcagcgaggagatgctgaccatcgtgtccatgctgtcggtgcagaac
gtcttctacaggcccaaggataaacaagccctcgcagaccagaagaaagccaagttccac
cagaccgaaggggaccacctcaccctgctggccgtgtacaactcctggaagaacaacaag
ttctccaacccgtggtgctatgagaacttcatccaggctcgctctctgcgccgggcccag
gatattcgcaagcagatgttaggcataatggacagacacaagctggatgtggtctcctgt
ggcaagtccacggtgcgagtgcagaaggccatctgcagtggattcttccggaacgctgcc
aagaaagacccacaggagggctaccggacgctgatcgaccagcaggtggtctacatccac
ccttccagcgctctcttcaacagacagcccgaatgggtggtgtaccacgagctggtgctg
accacgaaagagtacatgcgtgaggtcaccaccatcgaccccaggtggcttgtggagttt
gctccagccttcttcaaggtctccgacccgaccaagctgagcaagcagaagaagcagcag
cgtctcgaacccttgtacaatcgctacgaggagcccaacgcttggagaatatcccgggcc
ttccgccggcgctga
DBGET
integrated database retrieval system
