Mirounga leonina (Southern elephant seal): 118025171
Help
Entry
118025171 CDS
T07472
Symbol
TRPV1
Name
(RefSeq) transient receptor potential cation channel subfamily V member 1 isoform X1
KO
K05222
transient receptor potential cation channel subfamily V member 1
Organism
mlx
Mirounga leonina (Southern elephant seal)
Pathway
mlx04080
Neuroactive ligand-receptor interaction
mlx04750
Inflammatory mediator regulation of TRP channels
Brite
KEGG Orthology (KO) [BR:
mlx00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
118025171 (TRPV1)
09150 Organismal Systems
09157 Sensory system
04750 Inflammatory mediator regulation of TRP channels
118025171 (TRPV1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
mlx04040
]
118025171 (TRPV1)
Ion channels [BR:
mlx04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
118025171 (TRPV1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ank
Ank_2
Ank_3
Ion_trans
Ank_5
Ank_4
Motif
Other DBs
NCBI-GeneID:
118025171
NCBI-ProteinID:
XP_034883397
LinkDB
All DBs
Position
Unknown
AA seq
730 aa
AA seq
DB search
MACPAPSGSLPPPPHLLDLVSPGADGPILASAHWVFFASGSRGYSLCYCSLTLGGSNYSS
PRSGVPLGVSTPASGSPRAPFGHSGLLSSFVGESSGIFLPKSSPLHLSKHRTVSTKPTAR
ISTGQTALHIAIERRNMALVTLLVENGADVQAAANGDFFKKTKGRPGFYFGELPLSLAAC
TNQLGIVKFLLQNSRQPADISARDSVGNTVLHALVEVADNTADNTKFVTSMYNEILILGA
KLHPTLKLEELTNKKGLTPLALAARSGKIGVLAYILQREIQEPECRHLSRKFTEWAYGPV
HSSLYDLSCIDTCEKNSVLEVIAYSSSETPNRHDMLLVEPLNRLLQDKWDRFVKRIFYFN
FFVYCLYMIIFTTAAYYRPVDGLIQYFLQRRPSMKTLFVDSYSEMLFFVQSLFMLGTVVL
YFCHHKEYVASMVFSLAMGWTNMLYYTRGFQQMGIYAVMIEKMILRDLCRFMFVYLVFLF
GFSTAVVTLIEDGKNNSVPAESTSHRWRGPGCRPPDSSYNSLYSTCLELFKFTIGMGDLE
FTENYDFKAVFIILLLAYVILTYILLLNMLIALMGETVNKIAQESKNIWKLQRAITILDT
EKSFLKCMRKAFRSGKLLQVGYTPDGKDDYRWCFRVDEVNWTTWNTNVGIINEDPGNCEG
IKRTLSFSLRSGRVSGRNWKNFALVPLLRDASTRERHSAQPEEVHLRHFAGSLKPEDAEV
FKDPVALGEK
NT seq
2193 nt
NT seq
+upstream
nt +downstream
nt
atggcatgtcctgctcccagcgggtccttgcccccacccccccacctgctggacttggtt
tctcccggggccgacggtcccatcctcgcctctgcgcactgggtgttctttgcctctgga
agccgtggctactctctctgctactgttccttgacgttgggcggttctaactactccagt
ccccggtctggtgttcccctgggggtctctactcctgcctcagggagtccccgggccccc
ttcgggcattccggcctgctctcctcttttgtgggggagtcatctggcatttttctgccc
aagtcttcccccttgcacctgtccaagcacaggactgtgagtacaaagccaacggcacgc
atctccacaggccagacggccctgcacattgccattgagaggcggaacatggcactagtc
acgctcctggtggagaacggggcagacgtccaggctgcagccaacggggacttctttaag
aaaaccaaagggcggcctggcttctactttggtgagctgcccctctccttggctgcgtgc
accaaccagctgggcattgtgaagttcctgctgcagaactctcggcagccggcagacatc
agcgccagggactccgtgggcaacacggtgctgcacgcgctggtcgaggtggccgacaac
acagcggacaacaccaagttcgtgacgagcatgtacaacgagattctgatcctaggggcc
aagctccaccctacactgaagctggaggagctcaccaacaagaaggggctgacaccactg
gctctggccgccaggagtgggaaaattggggtcttggcctatattctccagagggagatc
caggagcctgagtgcaggcatctgtccaggaagttcaccgaatgggcgtatgggcccgtg
cactcctcgctctatgacctgtcctgcatcgacacttgtgagaagaactcggtgctggag
gtgatcgcctacagcagcagtgagacccccaatcgccacgacatgcttttggtggaacct
ctgaaccgactcctgcaggacaaatgggacagatttgtcaagcgcatcttctacttcaac
ttcttcgtctactgcttgtatatgatcatcttcaccacggcagcctactacaggcctgtg
gatggcttgattcaatatttcctgcagaggcggccatcaatgaagaccttgtttgtggac
agctacagtgagatgcttttttttgtgcagtcactgttcatgctggggaccgtggtgctg
tatttctgccaccacaaggagtacgtggcctccatggtgttctccctggccatgggctgg
accaacatgctctactatacccgcggcttccagcagatgggcatctatgctgttatgatt
gagaagatgatcctgagagacctgtgtcgcttcatgtttgtctaccttgttttcttgttc
gggttttccacagcggtggtgacgctgattgaggatgggaagaataactctgtgccggct
gagtccacatcgcacaggtggcgagggcctggctgccggccacccgacagctcctacaac
agcctgtactccacgtgtctggagctgttcaagttcaccattggtatgggcgacctggag
ttcacagagaactatgacttcaaggctgtcttcatcatcttgttgctggcctatgtgatt
ctcacctacatccttctgctcaacatgctcattgcccttatgggtgagactgtcaacaag
atcgcgcaggagagcaagaacatctggaagctacagagagctatcaccatcctggacacg
gagaagagcttccttaagtgtatgaggaaggccttccgctcaggcaagctgttgcaagtg
gggtacacacctgatggcaaggatgactacaggtggtgtttcagggtggatgaggtcaac
tggaccacctggaacaccaatgtaggtatcatcaatgaagacccgggcaactgtgagggc
atcaagcgcaccctgagcttctccctgcggtcaggcagagtttcaggaagaaactggaag
aactttgccctggttccccttttaagagatgcaagtacaagagaaaggcactctgcccag
ccagaggaagttcatctgaggcactttgcagggtccctcaagccagaagatgctgaggtc
ttcaaggatcctgttgctttaggggagaagtga
DBGET
integrated database retrieval system
