Mirounga leonina (Southern elephant seal): 118026268
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Entry
118026268 CDS
T07472
Symbol
VPS13A
Name
(RefSeq) vacuolar protein sorting-associated protein 13A isoform X1
KO
K19525
vacuolar protein sorting-associated protein 13A/C
Organism
mlx
Mirounga leonina (Southern elephant seal)
Brite
KEGG Orthology (KO) [BR:
mlx00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
mlx04131
]
118026268 (VPS13A)
Membrane trafficking [BR:
mlx04131
]
Endosome - Golgi transport
Rab GTPases and associated proteins
Rab associated proteins
118026268 (VPS13A)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
VPS13_N
VPS13_M
VPS13_VAB
VPS13_C
RRM_fung
Mer2
Motif
Other DBs
NCBI-GeneID:
118026268
NCBI-ProteinID:
XP_034884902
LinkDB
All DBs
Position
Unknown
AA seq
3171 aa
AA seq
DB search
MVFESVVVDVLNRFLGDYVVNLDTSQLTLGIWGGAVALKNLEIKENALSQLDVPFKVKVG
HIGNLNLIIPWKNLYTQPVEAVLGDIYLLIVPSSKIKYDPLKEEKQLLEAKQHELKRIEE
AKQKVADQEKLRVEKQDTFTEKLITQIIKNLQVKISNIHIRYEDDITNRDNPLSFGISLQ
NLSMQTTDQNWVPCLHDETEKLFCKLIRLDNLFAYWNVKSQLFYLNDYDESLDSLKKGIV
NGNIVPKGYDFVFRPISANAKLQMNRRSDFDFSAPKINLDVELHDIAIELNKPQYFSVME
LLESVDMMTQNLPYRKFKPDVPLHYHARDWWAYAIQGILEVNVCPRLRMWSWKHIREHRQ
KMKQYKELYKKKITTKKPTGEILMSLEELEKTLDVFNITISRQQAEVEVKKAGYRIFREG
AKDSEENKGWFSWLWTWSEPRSKEQPDVKPGILEEMLTSEEKTLLYEAIGYSETAVDPTL
PKTFEAMKFFVHLKSMSIVLREKRETPELLDIVVEEFSTLIVQRPGAQAIKFETKIDSFH
VTGLPDNSTKPRLLSSLDDATSLFQIIFEINPLDETVAQRCIIEAEPLEMIYDARTVNSI
VEFFRPPKEVNLTQLTSATLTKLEEFRDKTATGLLYIIETQKVLDLKINLKASYVIIPQG
GIFSPTSNLLLLDLGHLKVTSKSRSELPDMKPAGARLEEIMHRAYDSFDVQLTSIQLLYS
TVGDDWREARKLSVSTQHILVPMHFNVELSKAMVFMDLRMPKFKIFGKLPLISLRISDKK
LQGILELIESIPKPTPATETYAPAKPFQIQRSTSLGTSQISQKMLPFLELSCVDDDSEEE
FFDAPCSPLDEPLQSPTEIQSYQKKFQKPDCSKNMIQYKIRFEVPEVLIQFYHLVGDSEL
PVVEVDVLGLGTDVELRTFDLKANAFLKEFCLKCPEHTDANKKPIYLITTLDNTMEDLLT
LEYVKAEKNLPNLKSTYNNAVQLIKVNFSSLDIHLHTEALLNTINYFSNIIPQLEEKPAT
VSVAETEDKGEVVKKMSLKLSKNEDVITLQILAELSCLQIFIQDQKRNIAEIKIEGLDSE
IIMRPAATEINAKLRNIIVLDSDKTAVYKKAVYITGKEVFSFRVISFVDATAGSAYTDMN
VVDIQINLTVGCIEVVFVTKFLYSILAFIDNFQAAKQALAEATVQAAGMAATGVKELAQR
SSRMALDVNIKAPVVVIPQSPVSENVFVADFGLITMTNTFHIITESQSNPPPVIDLITIR
LSEMRLYRTQFIDDAYQEVLDLLLPLNLEVIVERNLSWEWYQEVPCFNVNAQLKPMEFIL
SQEDITTIFKTLYSNIWYEEGGGASSAGVKDQNSVNSGATNASHHLEGTTVVTAAVVEIH
SQASQVKTTLNMSFRTDYLTMVLYSPGPEQTSFTDVRDPSLKLAEFKLENIISTAKMYTD
DSTFSSFSLKNCILDDKRPHVRKATPRMIGLTVGFDKKDMMDVKYRRVRDGWVTDLVLQE
TYICASVEFLLTVANVFLEAYTTGTAVETSVQTWTAKEEVSVQESEKWEINIIIKNPEIV
FVADMTRSDAPALVITTQCEICWKGDLENNTMTAAIKDLQVRACPFLPVKRKGKITTVLQ
PCDLFYQATQIGTDPQVIDISIKSLTLKVSPVIINTVITITSALYTSKDTIPQETTSSTV
HLWEKKDTKNLKMWFLEEPNEVENKAPTTELILKGEMIRVNIDSIFIVLEAGIGPRTVPM
LLAKSRFSGEGKNWSSLINLYCQLELEVHYYNEMFGVWEPLLEPLEIDQTEDFRPWNLGI
KMKKKAKKAIVDSDTEEENYKVPEYKTVISFHSKDQLNITLSKCGLVMLNNLVKAFTEAA
TGASTVFIRDLAPFMILNSLGLTVSVSPSDSFSVLNVPLAKSYVLKNEESLSMDYVGTKD
NDHFNAMTSLSSKLFFILLTPVNHSTADKIPLTKVGRRLYTVRHRASGVERSIVCQVDGV
EGSKKITIRSPVQIKNHFSIPLCVYEGNTLLGTASPGSEFNIPLTSYRSPLSLKPEDEDY
QACERIDFEEIIKNDGTFLKKKCKSKNTAKKPFNIHVVPEKDNLSSLSVYSEDGWDLPYI
MHLWPPILLRNLLPYKIAYYIEGIEHKVYTLNEGHSAHICTVHLEKARLHLKLLDYLNHD
WKSEYHIKPNQQDISFINFTCVTEIEKTDLDIAIHVTYNIGQTVVAFHSPYWMVNKTSRM
LQYKADGIHRKHPPNYKKPVLFSFQPKHFFNNNKVQLMITDSELSDQFSIDTVGSHGAVK
CKGLKMDYQVGVTIDLSSFNITRIVTFTPFYMIENKSKYHISVAEQGNDKWLSLDLEQCI
PFWPEDASNALLIQVERNQGPPKKIHFNKQANCILLRLDNELGGIIAEVNLAEHSTVITF
SDYHDGAAPFLLINHTKSDIVQYNQSSLSEIEDSLPPGKAVFYTWADPVGSRKLKWRCGK
SHGEVTQKDDMMTPINLGKKTIYLVSFFEGLQRIILFTEDPRVFKATYESEKAELAEQEI
VLALQDVGISLVNNYTKQEVAYIGITSSDVVWETKPKKKARWKPMSVKHTEKLEKEFKEY
TESSPSEDKVVELDTNIPVRFTPSGTNMKILQPHVIAIRRNYLPALKVEYSTSAHQSSFR
IQVYRIQIQNQIHGAIFPFVFYPIKPPKSVTMDSAPKPFTDVSIVMRSAGHSQISRIKYF
KVLIQEMDLRLDLGFVYALAELMTEAEVTEKTEIELFHKDIEAFQEEYKTASLADSSQVS
LYEYFHISPIKLHLSVSLSSGREEAKDSEQQEGLMAVRSLNLLLKSIGATLTDVQDVVFK
LAFFELNYQFHTASELQSEVIRHYSKQAIKQMYVLILGLEVLGNPFGLIREFSEGVEAFF
YEPYQGAIQGPEEFVEGMALGLKALVGGAVGGLAGAASKITSAMAKGVAAMTLDEDYQQK
RREAMNKQPAGLREGITRGGKGLVSGFVSGITGIVTKPIKGAQKEGAAGFFKGVGKGLVG
AVARPTGGIIDMASSTFQGIKRATETSDEVESLRPPRFFNEDGVIRPYRLRDGTGNQMLQ
VMENGRFAKYKYFTHVMINKTDMLMITKSGVLFVTKGTFGQLTCEWQYSFDEFTKEPFIV
HGRRLRIEAKERVKSVFHAKEFGKIINFKTPEDARWILTKLEEAREPSPRF
NT seq
9516 nt
NT seq
+upstream
nt +downstream
nt
atggtgttcgagtcggtggtcgtggacgtgttgaaccggttcttgggggactatgtggtg
aacctggacacgtcccagctcaccctgggcatctggggaggagctgtagccttgaagaat
cttgaaattaaagaaaacgctctgagtcaactggatgtaccatttaaagttaaagttggt
catataggtaatcttaatcttataattccgtggaaaaacctgtatactcaaccagttgaa
gctgtcctgggagacatttatttactcatagtgccttcttctaaaataaaatatgatcct
ttaaaagaagaaaaacaactcttggaagcaaaacaacatgaacttaaacgaatagaagaa
gcaaaacaaaaagtagctgatcaagaaaaacttcgggtggagaaacaggacacttttacg
gaaaaattaattactcagatcataaaaaatcttcaggtcaaaatttccaacatccatatt
cgttatgaggatgatatcacaaatcgagacaacccactgtcatttggtatttcccttcaa
aatctcagcatgcagacaactgatcaaaactgggttccatgtttacatgatgaaactgag
aaactattttgtaagttaatccgattggataacctttttgcctattggaatgtgaagtct
cagttgttttaccttaatgattatgatgaatcattggacagcttgaagaagggcattgtc
aatggaaatattgttccgaaaggttatgattttgtttttcgccccatatctgctaatgcc
aaacttcagatgaatcggcgatcagattttgacttttctgcccccaagataaacctggat
gttgagttacatgacatagcaattgaacttaataaaccacagtatttcagtgttatggag
cttcttgaatcagttgatatgatgacgcaaaatctgccatataggaaattcaaacctgat
gtacctcttcactatcatgccagagactggtgggcttatgctatacaaggtattcttgaa
gtaaatgtctgcccccggttacggatgtggtcatggaagcatattagagaacacaggcaa
aaaatgaagcagtataaagaactgtataaaaaaaagataacaactaagaagccaactggt
gaaattctcatgtctttggaggagttggaaaagaccttggatgtatttaatataactata
tcaagacaacaggcagaagttgaggtaaagaaagctggatataggattttcagagaagga
gcaaaagattcagaggaaaataaaggatggtttagctggctgtggacttggtcagaacca
agaagtaaagaacaaccagatgttaagcctggaattcttgaagaaatgttgacctctgaa
gaaaaaactttactctatgaagcaattggctatagtgaaacagcagttgatccaaccttg
ccaaaaacatttgaagccatgaagttctttgttcacttgaaaagtatgtctattgttcta
agggaaaaacgagagacacctgagctgttagatattgtagtggaagaatttagcactttg
attgtgcaaagaccaggagcacaagccattaaatttgaaaccaaaattgattcatttcat
gttactggcttaccagataattcaacaaaaccccgcctcctttcttcattggatgatgct
acgtcactcttccaaattatatttgagataaatccattagatgaaactgttgctcaaaga
tgtatcatagaagctgaacctttagaaatgatatatgatgcaagaacagtgaatagtata
gtggaattcttcagacctccaaaagaggtaaatctaacacagctcacgtcagcgactttg
acaaaacttgaagaatttcgtgacaagacagcaacaggtctactgtatattattgaaaca
cagaaagttcttgatctcaaaattaatttgaaggcttcatatgttattatcccacaaggt
ggaatttttagccctacatcaaatctactacttttggatcttggtcatctaaaggtgaca
agtaaaagtcgttcagaattgccagatatgaaaccagctggggccagacttgaagagatc
atgcatagagcttatgattcctttgatgttcagcttacaagcatacagctgctttacagc
acagttggcgatgattggagagaagcacgaaaactcagtgtatctacacagcatattttg
gtacctatgcacttcaatgtggagctctctaaggccatggttttcatggatttaaggatg
cccaaattcaagatttttggaaagttaccactgatttctttacgaatctcagataaaaaa
ctgcaaggaattttggaattgattgaaagcattccgaaacccacacctgcaactgaaaca
tatgcccctgccaaaccatttcagattcaaaggtccacttctttgggaacatcacagatt
tcacagaaaatgcttcctttcttggaactttcatgtgttgatgatgattcagaggaagaa
ttttttgatgcaccatgtagtcccttggacgaacctcttcaatctcctactgaaattcaa
agttaccaaaaaaaatttcaaaagccagattgttcaaaaaatatgattcagtataaaata
agatttgaagtgccagaggttttgattcagttttatcaccttgttggagattctgaacta
cctgtggtagaagttgatgttttaggattgggcacagatgttgaacttagaacatttgat
ttgaaagcaaatgcctttttgaaagagttctgcctaaaatgcccagaacacactgatgca
aacaagaaaccaatttatttgattacaacactggataatacgatggaagatctgctaaca
ttggaatatgtgaaggctgaaaagaacctacccaacttgaaaagtacttataacaatgct
gtgcaactgattaaggtgaatttttcctctttggatattcatttacatactgaagcactt
ctgaatacaataaattattttagtaatataattccacaattggaagaaaaaccagccaca
gtgtctgttgcagagactgaagacaaaggagaggtcgttaaaaaaatgtctttaaaatta
tccaagaacgaagatgttattaccttgcagattttagcagaattatcttgtttacagatc
tttattcaagatcagaaacgtaacattgctgaaattaagatcgaagggcttgattctgag
atcattatgaggcctgctgcaactgaaataaatgcaaagctaaggaatataattgttttg
gattctgataagacagctgtatacaaaaaggctgtttacatcactggaaaagaagttttt
agcttcagagtgatttcttttgtggatgcaactgctggttctgcatacacagatatgaat
gtggttgacattcaaattaatttaactgttggttgcattgaagtagtttttgtcacaaaa
tttctttattctatattggcttttatagataattttcaagcggctaaacaagccttggct
gaggctactgttcaggcagcaggaatggctgctactggtgtaaaagaattggcacagagg
agttctagaatggcgttggatgttaacatcaaagccccagtggtggtcatcccacagtct
ccagtttctgaaaatgtttttgttgctgattttggactaattacaatgacaaacacattc
catataataacagagagccagagcaaccccccacccgttattgatttgataacaataagg
ttgagtgaaatgcgactctacaggactcaatttattgatgatgcataccaggaagtacta
gatctgctattgccattaaatcttgaggtgattgttgagcgaaatttatcttgggagtgg
taccaggaagttccttgttttaatgtaaatgctcagctaaagcccatggagttcattctt
agtcaagaagatataacaactatttttaaaacattatatagcaatatatggtacgaagaa
ggtggtggtgcctcatctgcaggagtaaaagatcagaatagtgttaatagtggagctact
aatgcttcacaccatttagaaggaacaactgtagtgactgctgccgtggtggaaatacat
tcacaggcctctcaagttaagacaacactgaatatgagcttcaggactgactatctcacc
atggtactgtatagtccaggtcctgaacagacttcctttacagatgttcgtgatccttct
ctgaaacttgctgaatttaagttggagaatatcataagcactgcaaaaatgtatacagat
gactcaacattttcttccttttcattaaaaaactgtattttagatgataaaaggccccat
gtcaggaaggcaactcctagaatgataggactgacagtcgggtttgacaaaaaggacatg
atggatgtaaagtatagaagagtcagagatggttgggtgactgatttagtccttcaagaa
acctatatttgtgcaagtgtggaatttctgctgacagttgcaaatgtctttcttgaggcc
tacaccacaggcactgctgtagaaaccagtgttcaaacatggaccgctaaggaagaagta
tctgtacaggaatcagagaagtgggaaattaatattattattaaaaatcctgaaattgtg
tttgtggctgatatgacaagaagtgatgctcctgcattagtcattacaacacaatgtgaa
atttgttggaaaggtgaccttgagaataatacaatgactgctgccattaaagatcttcaa
gtgagagcatgcccatttcttccagtcaagagaaaaggcaaaatcacgactgttttgcag
ccctgtgacttgttctatcaagctactcaaataggtacagatccacaagtgattgatata
tcaataaagtccctcacactaaaggtttcaccggttatcataaatactgtgattaccata
acatcagcactttatacatccaaggataccatcccacaagaaactacttcttctacagta
cacttatgggaaaagaaggatacaaagaatttaaaaatgtggtttcttgaagagccaaat
gaagttgaaaacaaagctcccacaactgaattgatactcaaaggagagatgataagagtg
aacattgactctatttttatagttcttgaggctggaattggtcctagaacagtgcctatg
ctgttggccaagtcacgtttttcaggggagggcaaaaactggagttctttgataaatctc
tactgtcagcttgaactagaagtgcattattacaatgaaatgtttggtgtatgggagcct
ttgcttgaacccttagaaattgatcagactgaggattttagaccatggaatcttggaatc
aagatgaaaaagaaagcaaaaaaggccattgttgattcagatactgaagaagaaaattac
aaagtgccagaatataaaactgttatcagtttccattcaaaagaccaactaaacattaca
ttatccaaatgtggccttgtaatgttaaataatttagtcaaggcatttacagaagctgcc
actggagcttcaactgtcttcatacgggatctagcgccatttatgattttaaattctctt
ggacttactgtctctgtttcaccaagtgattcttttagtgtacttaacgttccattggca
aaatcatatgtattgaaaaatgaggagagtttaagtatggactatgtgggaaccaaagac
aatgatcatttcaatgcaatgaccagcctaagcagtaaactcttcttcattcttctcaca
cctgttaaccactctactgctgataaaatccctttaacaaaagtgggacgacgactgtac
actgtaagacacagagcgtctggggttgaaagatcgattgtttgtcaagttgatggagtg
gaaggaagtaagaagataacaattcgctccccagtgcagattaaaaatcatttttcaatc
ccactttgtgtttatgaagggaacactttattgggaacggcttcacctggaagtgaattc
aacataccattaacatcttaccgatcacccctttctctgaagccagaagatgaggactat
caagcgtgtgaaagaattgactttgaagaaattataaaaaatgatggcacttttctaaag
aagaaatgtaaatctaaaaacactgctaagaaaccatttaacattcatgttgtcccggaa
aaagataatttgtcttctctgtccgtgtattcagaagatggttgggacttaccatacata
atgcatttgtggccaccgatcctgctccgaaatcttcttccttataaaattgcttattat
atagaggggattgaacataaagtttatactctaaatgaaggacattcagcccacatttgt
actgtgcatttggaaaaagccagactacatttaaaattacttgactatcttaatcatgat
tggaaaagtgaatatcatataaaacctaatcagcaagatattagtttcatcaattttacc
tgtgttacagaaatagaaaagactgatttagatattgctatccatgtgacttataatatt
ggccagacagttgtggcatttcatagtccttattggatggtcaataaaaccagtcgaatg
ttacagtataaagcagatggaattcatcgaaagcatccacctaattataaaaagccagtt
ctgttttcttttcaaccaaagcacttttttaataataataaggttcagcttatgataact
gatagtgaattatcggatcagttttcaattgatactgttggtagtcatggagctgttaaa
tgtaaaggcctgaaaatggactatcaagttggtgtcactatagacctcagcagttttaac
atcaccagaattgtgacatttactcctttttatatgatcgaaaacaaaagcaaatatcat
atatcagtggccgaacagggaaatgataaatggctctctcttgatttggagcagtgtatc
cccttttggcccgaggatgcttctaatgcacttcttattcaagttgaaagaaatcaaggc
cctcccaaaaagatacattttaacaagcaagcaaattgtattttattgcgtctggataat
gagcttggaggtattatagcagaagttaatttggctgagcattctacagttattacattt
tcagattatcatgatggagcagctccattcctattaataaatcacaccaagagtgatatt
gttcagtataatcaaagttctctcagtgaaatagaagattccctccctcctggaaaagca
gtattttatacatgggctgatccagtgggctctagaaagctgaagtggagatgtggaaaa
agccatggtgaagtaacacaaaaggatgatatgatgacacctataaatttggggaaaaag
accatttatttagtttcattctttgaaggcttacaacgcattattttattcactgaagat
ccaagggtatttaaagcaacatatgaaagtgagaaagcagagttagcagagcaagaaatt
gtgttggccttacaagatgttggaatttctctcgtcaacaactacacaaagcaagaagta
gcctatattggcattacaagttctgatgtggtttgggagacaaagcccaagaagaaggca
agatggaagccaatgagtgtaaagcacactgagaagttagagaaagaatttaaggaatat
actgaatcttcaccttcagaagataaggttgttgaattggacactaacattccggttcgc
ttcacacctagtggtactaacatgaaaattctgcagccacatgtaatagctataagaaga
aattatcttccagcattgaaagtagaatatagcacatccgcacatcagtcatcatttaga
attcaagtttacagaatacagatccaaaaccagatacatggtgctatatttccatttgtg
ttttatccaattaaacctcccaagtcggtcaccatggattcagctccaaagccctttaca
gatgtcagtattgtcatgagatctgcagggcattcccaaatatcacgtattaagtatttc
aaggtgttgatccaagaaatggacctcaggttagatcttgggtttgtctatgctttagca
gaacttatgacagaagccgaagtgactgaaaaaaccgagattgaactttttcataaagat
atagaagctttccaagaagaatataaaacagcttcattagcagattcatcacaagtcagt
ctctatgaatacttccatatatctcctatcaagttgcatttaagtgtttcactgagttcg
ggcagagaagaagctaaagattcagaacaacaggaaggactgatggccgttcgttcttta
aatcttttgctgaagagtattggtgccacccttacggatgtacaagatgtagtttttaag
cttgcattttttgaactgaactatcagttccatacagcatctgaactacagtctgaagta
ataagacactattcgaaacaggccattaagcaaatgtatgtactcattcttggacttgaa
gttttgggaaatccctttggcttgataagagaattttctgaaggtgtggaagcatttttt
tatgaaccttaccagggagccatccagggtcccgaagagtttgtggaggggatggcatta
ggactgaaggcactagttggtggagctgttggtggattagctggtgctgcctccaaaatc
accagtgctatggctaagggggtggcagccatgactctggatgaagactatcaacagaag
agaagagaggccatgaacaagcaaccagctggtctcagagaaggcatcactcgtggagga
aaaggcttagtgtctggttttgtaagtggcataacaggaattgttacaaaaccaatcaaa
ggagctcaaaaagaaggagcagctggtttctttaaaggtgttgggaaaggtttagttgga
gcagtggcaaggccaacgggaggcatcatagacatggccagcagtacatttcagggaata
aaaagagctacagagacttctgatgaagtggagagcctgcgaccgcctcgattctttaat
gaggatggagttatcagaccttacaggttgagggatgggactggaaaccagatgttacag
gtcatggaaaatgggagatttgcaaaatacaagtattttacccatgtcatgatcaataaa
acagatatgttaatgataactaaaagtggtgtattgtttgtaacaaaaggaacatttgga
cagcttacatgtgagtggcagtacagttttgatgagtttaccaaagagccattcattgtt
cacgggaggagattacgcattgaagcaaaggaacgggtgaagtctgtgtttcatgccaaa
gagtttggaaaaataattaacttcaagaccccagaggatgctaggtggatcctcacaaaa
ctagaagaagcaagagaaccttccccgagattctga
DBGET
integrated database retrieval system
