Mirounga leonina (Southern elephant seal): 118026334
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Entry
118026334 CDS
T07472
Symbol
VLDLR
Name
(RefSeq) very low-density lipoprotein receptor isoform X1
KO
K20053
very low-density lipoprotein receptor
Organism
mlx
Mirounga leonina (Southern elephant seal)
Pathway
mlx05017
Spinocerebellar ataxia
mlx05417
Lipid and atherosclerosis
Brite
KEGG Orthology (KO) [BR:
mlx00001
]
09160 Human Diseases
09164 Neurodegenerative disease
05017 Spinocerebellar ataxia
118026334 (VLDLR)
09166 Cardiovascular disease
05417 Lipid and atherosclerosis
118026334 (VLDLR)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
mlx04131
]
118026334 (VLDLR)
Membrane trafficking [BR:
mlx04131
]
Endocytosis
Clathrin-mediated endocytosis
Low-density lipoprotein receptor (LDLR) family proteins
118026334 (VLDLR)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ldl_recept_a
Ldl_recept_b
FXa_inhibition
cEGF
EGF_CA
EGF
hEGF
Motif
Other DBs
NCBI-GeneID:
118026334
NCBI-ProteinID:
XP_034885022
LinkDB
All DBs
Position
Unknown
AA seq
902 aa
AA seq
DB search
MGTSARWALWLLLALCWAPRESRATGAGRKAKCEPSQFQCTNGRCITLLWKCDGDEDCAD
GSDERNCVKKTCAESDFVCNNGQCVPSRWQCDGDPDCEDGSDENPEQCHMRTCRINEISC
GARSTQCIPGSWRCDGENDCDSGEDEENCGNITCSPDEFTCSSGRCISRNFVCNGQDDCS
DGSDELDCAPPTCGAHEFQCSTSSCIPLSWVCDEDADCSDQSDESLEQCGRQPVMHAKCP
ASETQCGSGECIHKKWRCDGDPDCKDGSDEVNCPSRTCRPDQFECEDGSCIHGSRQCNGI
RDCVDGSDEVNCKNGEGLLLGVSQRTARSSPTDGLLAFVFLFVVNQCLGPGKFKCRSGEC
IDIGKVCNQEQDCRDWSDEPLKECHVNECLVNNGGCSHICKDLVIGYECDCAAGFELIDK
KICGDIDECQNPGICSQICINLKGGYKCECSRGYQMDLATGVCKAVGKEPSLIFTNRRDI
RKIGLERKEYIQLVEQLRNTVALDADIAAQKLFWADLSQKAIFSASIDDKVGRHVKMIDN
VYNPAAIAVDWVYKTIYWTDVASKTISVATLDGTKRKFLFNSDLREPASIAVDPLSGFVY
WSDWGEPAKIEKAGMNGFDRRALVTVDIQWPNGITLDLIKSRLYWLDSKLHMLSSVDLNG
QDRRIVLKSLEFLAHPLALTIFEDRVYWIDGENEAVYGANKFTGSELATLVNNLNDAQDI
IVYHELVQPSGKNWCEEDMPNGGCEYLCLPAPQINDHSPKYTCSCPNGYNLAENGRECHS
SAVPVTYSETKGIHTTEIAPTSGLVPRGINVTTAVSEATVPPKGTSAAWAILPLLLLAMA
AVGGYLMWRNWQHKNMKSMNFDNPVYLKTTEEDLSIDIGRHSASVGHTYPAISVVSTDDD
LA
NT seq
2709 nt
NT seq
+upstream
nt +downstream
nt
atgggcacgtccgcgcgctgggcgctctggctgctgctcgcgctgtgctgggcgccccgg
gaaagccgcgccaccggagcgggaagaaaagccaaatgtgaaccctcccaattccagtgc
acaaacggccgctgtattacgttgctgtggaaatgtgacggggacgaagactgcgcggac
ggcagtgacgaaaggaactgtgtaaagaagacgtgtgccgagtctgactttgtatgcaac
aatggccagtgtgtccccagccggtggcaatgtgacggggatcccgactgtgaagacggc
tctgatgaaaacccggaacagtgccatatgagaacatgccgcataaatgaaatcagctgt
ggcgcccgctccactcagtgtatcccagggtcctggaggtgcgatggtgaaaatgattgt
gacagtggagaagatgaagaaaactgcggcaacatcacgtgcagccccgacgagttcacc
tgctccagcggccgctgcatctccaggaatttcgtctgcaacggccaggacgactgcagc
gacggcagcgacgagctggactgcgcgcccccgacgtgcggtgcgcacgagttccagtgc
agcacctcgtcctgcatccccctcagctgggtgtgcgacgaggatgccgactgctccgac
cagtcggacgagtccctggagcagtgcggccgccagccggtgatgcacgccaagtgcccg
gccagcgagacccagtgcggctccggcgagtgcatccacaagaagtggcgctgcgacggg
gaccccgactgcaaggacggcagcgacgaagtcaactgtccttcgcgaacctgccgccct
gaccagtttgagtgtgaggacgggagctgcatccacggcagcaggcagtgcaacggcatc
cgggactgtgtggacggctccgacgaggtcaactgcaaaaatggtgaggggctcctcctg
ggggtgagtcagaggactgcccggagcagccccaccgatggactcctcgcttttgtgttt
ctctttgtagtcaatcagtgcttaggccctggcaagttcaagtgcagaagtggggagtgc
atagatatcggtaaagtatgtaaccaggagcaggactgcagggactggagtgacgagccc
ctgaaggaatgtcatgtaaacgaatgcttggttaataatggtggctgttctcacatctgc
aaagacctcgttataggctacgaatgtgactgcgcagctgggtttgaactgatagataag
aaaatctgtggagatattgatgaatgccaaaatccgggaatctgcagccaaatttgtatc
aacttaaaaggcggttacaagtgtgaatgtagtcggggctatcagatggatcttgccact
ggcgtgtgcaaggcagtaggcaaagagccaagtctgatcttcacgaatcgaagagacatc
cggaagattggcttggagaggaaggaatatatccagctggttgaacagctaagaaacact
gtagctcttgatgcggacatcgctgctcagaaactgttctgggctgatctcagccagaag
gccatcttcagtgcctcaattgatgacaaggttggtagacatgttaaaatgatcgacaat
gtctataatcccgcggccattgctgttgattgggtgtacaagaccatctactggactgat
gtggcttctaagactatttcagtagctacccttgatggaaccaagaggaagttcctgttt
aactctgacttgcgggagcctgcctccatagctgtggacccactgtctggctttgtgtac
tggtcagactggggagaaccagctaaaatagaaaaagcaggaatgaatggatttgatagg
cgggccctggtgacagtggacatccaatggcctaatggaattacactcgaccttatcaag
agtcgtctctactggcttgactccaagttgcacatgctgtccagtgtggacttgaatggc
caagatcgcaggattgtcctcaagtctctggagttcctagctcatcctctcgcgctgacc
atatttgaggatcgtgtctactggatagatggggaaaatgaagcagtctacggggccaat
aaattcactgggtcagagctggccactctggtcaacaaccttaatgatgcccaagacatc
attgtctatcacgaactcgtccagccatcaggtaaaaactggtgtgaagaagacatgcca
aacggaggctgtgaatacttgtgcctgccagcaccacaaattaatgatcactctccaaaa
tacacctgttcctgtcccaatgggtacaatctggcggagaacggccgggagtgccacagt
tctgcagttcctgtgacttacagtgagacaaaaggtatccacacaacagaaattgcacca
actagtggactagttcctagagggatcaatgtgaccacagcagtatcggaggccactgtc
cccccgaaaggcacctcagctgcctgggccatccttcctctcttgctcttggcaatggca
gcggtaggtggctacttgatgtggcggaattggcagcacaagaacatgaaaagcatgaac
tttgacaatcctgtgtacttgaagactaccgaagaggacctgtcaatagacattggtaga
cacagtgcttctgttggacacacgtacccagcaatatcggttgtaagcacagacgatgac
ctagcttga
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