Mirounga leonina (Southern elephant seal): 118026736
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Entry
118026736 CDS
T07472
Symbol
TRUB1
Name
(RefSeq) probable tRNA pseudouridine synthase 1 isoform X1
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
mlx
Mirounga leonina (Southern elephant seal)
Brite
KEGG Orthology (KO) [BR:
mlx00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
mlx03016
]
118026736 (TRUB1)
Enzymes [BR:
mlx01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
118026736 (TRUB1)
Transfer RNA biogenesis [BR:
mlx03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
118026736 (TRUB1)
Prokaryotic type
118026736 (TRUB1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
Motif
Other DBs
NCBI-GeneID:
118026736
NCBI-ProteinID:
XP_034885618
LinkDB
All DBs
Position
Unknown
AA seq
362 aa
AA seq
DB search
MAAAEAAVVSSSSLETDTALVPETAGTAAATAAASPATAAVAAVAAAARTGSEARVSKAA
LATKLLSLSGVFAVHKPKGPTSAELLNRLKEKLLAEAGMPSPEWTKRKKQTLKIGHGGTL
DSAARGVLVVGIGRGTKMLTSMLSGSKRYIAIGELGKATDTLDSTGKVTEEKPYDKITQE
DIEGILQKFTGNIMQVPPLYSALKKDGQRLSTLMKRGEVVEAKPARPVTVYSLSLQKFQP
PFFTLVTAKDPDNMEIMDVECGGGFYIRSLVSDIGKELSSCANVLELTRTKQGPFTLEEH
ALPEDRWTIDDIAQSLEHCSSLLPAELALKKSKPEESNEQVLSCEYITLSETKGEDDVIK
TS
NT seq
1089 nt
NT seq
+upstream
nt +downstream
nt
atggcagctgctgaggcggcggtggtatcatcgtcatctttggaaacagacacagccctg
gtccctgaaactgcaggaacggccgcagcaacggccgccgcctcaccagcgacggctgca
gtggcggccgtcgcggccgctgccagaaccggatccgaagccagggtctccaaggccgct
ttggctactaagctgctgtccctgagcggcgtgttcgccgtgcacaagcccaaagggccc
acttcagccgagctgctgaatcggctgaaggagaagctgttagcagaagctggaatgcct
tctccagaatggaccaaaaggaaaaagcagactttgaaaattggacatggagggacgcta
gacagtgcagcccgaggagttctggtggttggaattggaaggggaacaaaaatgttgacc
agtatgttatcagggtccaagaggtatattgccattggagaactggggaaagctactgac
acgctagattctactgggaaagtaacagaagaaaaaccttacgataaaataacacaagaa
gatattgaaggcattctacagaaatttactgggaatataatgcaggtacctcccctctat
tctgcattaaagaaagatggacagagactttcaaccttgatgaagagaggtgaagtggta
gaagcaaaacctgccaggcccgttaccgtatacagtctctcccttcaaaaattccagcca
ccatttttcacattagttactgccaaagatcctgacaatatggaaataatggatgttgaa
tgtggaggaggtttttatataagaagcttggtcagtgacattggcaaagaactctcttcc
tgtgccaatgtcctagaactgacccgaaccaaacagggaccatttacgctagaagagcat
gcccttcctgaagacagatggacgattgatgacattgcacagtctctggaacattgctca
tctcttctcccagcagagttggcacttaaaaaatccaaacctgaggagtctaatgaacaa
gttttgagctgtgaatatataactctaagtgagacaaagggagaagatgatgtaattaag
acatcttaa
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