Mirounga leonina (Southern elephant seal): 118026936
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Entry
118026936 CDS
T07472
Symbol
COL6A2
Name
(RefSeq) collagen alpha-2(VI) chain isoform X1
KO
K06238
collagen type VI alpha
Organism
mlx
Mirounga leonina (Southern elephant seal)
Pathway
mlx04151
PI3K-Akt signaling pathway
mlx04510
Focal adhesion
mlx04512
ECM-receptor interaction
mlx04820
Cytoskeleton in muscle cells
mlx04974
Protein digestion and absorption
mlx05165
Human papillomavirus infection
Brite
KEGG Orthology (KO) [BR:
mlx00001
]
09130 Environmental Information Processing
09132 Signal transduction
04151 PI3K-Akt signaling pathway
118026936 (COL6A2)
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
118026936 (COL6A2)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
118026936 (COL6A2)
09142 Cell motility
04820 Cytoskeleton in muscle cells
118026936 (COL6A2)
09150 Organismal Systems
09154 Digestive system
04974 Protein digestion and absorption
118026936 (COL6A2)
09160 Human Diseases
09172 Infectious disease: viral
05165 Human papillomavirus infection
118026936 (COL6A2)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
mlx04147
]
118026936 (COL6A2)
00536 Glycosaminoglycan binding proteins [BR:
mlx00536
]
118026936 (COL6A2)
Exosome [BR:
mlx04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
118026936 (COL6A2)
Glycosaminoglycan binding proteins [BR:
mlx00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
118026936 (COL6A2)
Hyaluronan
Extracellular matrix or blood plasma proteins
118026936 (COL6A2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
VWA
Collagen
VWA_2
Motif
Other DBs
NCBI-GeneID:
118026936
NCBI-ProteinID:
XP_034885907
LinkDB
All DBs
Position
Unknown
AA seq
1021 aa
AA seq
DB search
MGAAKMLRGPCSAFLLWGLLGVLRAQQQIITPSASERNSCPEKADCPINVYFVLDTSESV
TMQSPIDSLLYHMRQFVRQFISQLQDETYLEQVALSWRYGGLHFSDVVKVFSPPDSDRAS
FTKSLENIVSIRKGTFTDCALANMTQEIRQLKGKGGVHFAVVITDGYVTGSPCGGIKLRA
ERAREEGIRIFTVAPDQNPNEQGLRDMASMPLELYRNNYATVRPDLEIDQDTINRIIKVM
KHEAYGECYKVSCLEIPGPPGPKGYRGQKGAKGNMGEPGEPGQKGRQGDPGIEGPIGFPG
PKGVPGFKGEKGEFGAEGRKGAPGLAGKNGTDGQKGKLGRIGPPGCKGDPGSRGPDGYAG
EAGNPGEQGDQGIKGDAGRPGRRGPPGDSGAKGSKGYQGNDGSPGSPGVKGAKGGPGPRG
PKGEPGRRGDPGAKGSPGSNGPKGEKGDPGPEGPRGLAGEVGNKGAKGDRGLPGPRGPQG
ALGEPGNKGSRGDPGDAGPRGESGQPGPKGDPGRPGFSYPGPRGTPGEKGEAGPPGPEGG
RGDFGPKGEPGRKGEKGEPADPGPPGEPGPRGPRGSPGPEGEPGPPGDPGLTECDVMTYV
RETCGCCDCEKRCGALDVVFVIDSSESIGYTNFTLEKNFVINVVNRLGAIAKDPKSETGT
RVGVVQYSHEGTFEAIQLDDERIDSLSSFKEAVKNLEWIAGGTWTPSALKFAYNQLIKES
RRQKTRVFAVVITDGRHDPRDDDLNLRALCNHDVTVTAIGIGDMFHEGHESENLYSIACD
KPQQVRNMTLFSDLVAEKFIDDMEDVLCPDPQIVCPDLPCQTELYVAQCTQRPVDIVFLL
DGSERLGEQNFYKARRFVEEVSRRLTLARRDDDPLNARVALLQFGGPGEQQVEFPLTSNL
TLIHQALQGARYLNSFSHVGAGIVYAINHVVRGARPGARRHAELAFVFLTDGVTGNDSLE
EAVHSMRKQNVVPTVVAVGGDVDTDVLSKISLGDATAVFREKDYDSLAQPGFFDRFIRWI
C
NT seq
3066 nt
NT seq
+upstream
nt +downstream
nt
atgggtgctgccaagatgctccgaggcccctgctccgccttcctgctctgggggctcctg
ggggtcctccgtgcccagcagcagatcatcacccccagtgcctctgagaggaacagctgc
ccagagaaggccgactgccccatcaatgtgtacttcgtgctggacacctcggagagtgtc
accatgcagtcccccatcgacagcctgctctaccacatgagacagttcgtgcgccagttc
atcagccagctgcaggacgagacctacctggagcaggtagccctgagctggcgctacgga
ggcctgcacttctccgacgtggtgaaggtgttcagcccgccggacagcgaccgggcctcc
ttcaccaagagcctggagaacatcgtttccatccggaagggcaccttcaccgactgtgcg
ctggccaacatgacccaggagatccggcagctcaagggcaagggtggggtccacttcgcg
gtggttatcaccgacggctacgtcactggcagcccgtgcgggggcatcaagctgcgggct
gagcgagcccgcgaggagggcatccggatcttcaccgtggcccccgaccagaacccgaac
gagcagggtctgcgggacatggccagcatgccccttgagctctaccgtaacaactatgcc
actgtgcgtcctgacttggagatcgaccaagacaccatcaaccgcatcatcaaggtcatg
aaacatgaagcctatggagagtgctacaaggtgagctgtctggagatccccgggcccccc
ggccccaagggctaccgcggacagaagggcgccaagggcaacatgggcgagccaggagag
cccgggcagaagggacgacagggagacccaggcatcgaaggccccattggattcccagga
cccaagggtgttcctggtttcaaaggagagaagggtgaatttggagctgagggccggaag
ggggcccctggcctggccggcaagaacgggaccgatggacagaagggcaagctggggcgc
atcgggcctccgggctgcaagggagacccagggagtcggggccccgatggatacgcaggg
gaagccggcaaccctggggagcaaggggaccagggcatcaagggagatgctggtcgccca
ggacgcagaggacccccaggagacagcggggccaaaggaagcaagggttaccaaggcaac
gacggatccccgggaagtcccggtgtgaaaggagccaagggtggacctgggccccgagga
cccaaaggcgagcctgggcgcaggggggacccaggagccaagggcagcccaggcagcaac
ggccccaagggtgagaagggagaccctggccctgagggtccccggggtctggctggggag
gttggcaacaaaggagccaagggagaccgaggcttgcctggacccagaggccctcagggg
gctctgggcgagcccgggaataagggatctcggggagaccccggtgacgctggtccccgt
ggagagtcaggacagcctggtcccaagggagaccccggcaggcctggatttagctaccca
ggaccccgaggaacacccggagagaaaggcgaggctggcccacccggccctgaggggggc
agaggtgactttggtcccaaaggagagcccgggaggaaaggcgagaagggcgagcctgca
gatcccggtccccctggtgagcccggccctcgggggccaagaggatccccaggacccgag
ggagagcccggcccccctggagaccccggcctcacggagtgcgatgtcatgacctacgtg
agggagacgtgcgggtgttgcgactgtgagaagcggtgcggggccctggacgtggtgttc
gtcatcgacagctccgagagcattggctacaccaacttcaccctggagaagaacttcgtc
atcaacgtggtcaacaggctgggagccattgccaaggaccccaagtcagagacggggacc
cgcgtgggcgtggtgcagtacagccacgagggcacctttgaggccatccagctggacgat
gagcgcatcgactcgctatccagcttcaaggaggccgtcaagaacctggagtggatcgcc
ggcggcacctggacgccctcagccctcaagttcgcctacaaccagctcatcaaggagagc
cggcgccagaagacccgcgtgtttgcggtggtcatcacggacggccgccacgacccccgg
gacgacgacctcaacctgcgggcgctgtgcaaccacgatgtcacggtgacagccatcggc
attggggacatgttccacgaggggcacgagagcgagaacctctactccatcgcatgcgac
aagccgcagcaggtgcgaaacatgaccctcttctctgatctggtggccgagaagttcatc
gacgacatggaggacgtcctgtgcccagaccctcagatcgtgtgcccggaccttccctgc
caaacagagctgtacgtggcccagtgcacgcagcggcctgtggacatcgtcttcctgctg
gacggctccgagcggctgggcgagcagaacttctacaaggcgcggcgcttcgtggaggag
gtgtcccggcggctgacgctggcgcgcagggacgacgacccgctcaacgcgcgcgtggcc
ctgctgcagttcgggggccccggcgagcagcaggtggaattcccgctcacctccaacctg
acgctcatccaccaggcgctgcaaggcgcgcgctacctcaactccttctcgcacgtgggc
gcgggcatcgtgtatgccatcaaccacgtggtgcgcggcgcgcgacctggggcgcgccgc
cacgccgagctggccttcgtgttcctcaccgatggcgtcacgggcaacgacagcctggag
gaggccgtgcactccatgcgcaagcagaacgtggtgcccactgtggtggccgtggggggc
gacgtggacacagacgtgctgtccaagatcagcctgggcgacgccaccgccgtcttccgc
gagaaggactacgacagcctggcccagcctggcttcttcgacaggttcatccgctggatc
tgctag
DBGET
integrated database retrieval system
