Mirounga leonina (Southern elephant seal): 118027326
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Entry
118027326 CDS
T07472
Symbol
MSH5
Name
(RefSeq) mutS protein homolog 5 isoform X1
KO
K08741
DNA mismatch repair protein MSH5
Organism
mlx
Mirounga leonina (Southern elephant seal)
Brite
KEGG Orthology (KO) [BR:
mlx00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
mlx03036
]
118027326 (MSH5)
Chromosome and associated proteins [BR:
mlx03036
]
Eukaryotic type
Meiosis-specific proteins
Others
118027326 (MSH5)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_IV
Motif
Other DBs
NCBI-GeneID:
118027326
NCBI-ProteinID:
XP_034886450
LinkDB
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Position
Unknown
AA seq
854 aa
AA seq
DB search
MASVGAIPGRTPQGPGPGAASASFPSLAPVPGRGESEEEENEQEPAEVSGAVLSRAAGAW
IHLCVLWTSGYLGIAYYDTSDSTIHFMPDAPDHESLKLLQRVLDEISPRSVVTSAKQDEN
MTRFLGKLASQEHREPKRPEIVFLPSVDFGLEISKQRLLSGNYAFIPDSMTTTEKILFLS
SIIPFDCLLTVRALGGLLKFLGRRRIGVELEDYNISVPILGFKKFVLTHLVSIDQDTYSV
LQIFKSESHPSVYKVASGLKEGLSLFGILNRCRCKWGEKLLRLWFTRPTQDLGELNARLD
VIQFFLLPQNLDIAQMLHRLLGHIKNVPLILKRMKLSHTKASDWQVLYKPAFCPFLLQTV
YSALGLRDACRSLPQSIQLFQDIAQEFSDDLHHIASLIGKVVDFEGSLAENRFTVLPNID
PDIDEKKRRLMGLPSFLTEVARKELENLDSRIPSCSVIYIPLIGFLLSIPRLPSMAEASD
FEIEGLDFMFLSEEKLHYRSARTKELDALLGDLHCDIRDQETLLMYQLQCQVLARAAVLT
RVLDLASRLDVLLALASAARDYGYSRPRYAPQLIGVRIQNGRHPLMELCARTFVPNSAEC
GGDRGRVKVITGPNSSGKSIYLKQVGLITFMALVGSFVPAEEAEIGAVDAIFTRIHSCDS
ISLGLSTFMIDLNQMAKAVNNATKQSLVLIDEFGKGTNTVDGLALLAAVLRHWLALGPTC
PHIFVATNFLSLVQLQLLPQGPLVQYLTMETCEDGDDLVFFYQVCEGIAKASHASHTAAQ
AGLPDQLLTRGKEVSDLIRSGKPIKPVKELLKEKQMENCQTLVDKFLKLDLDDPNLDLDL
FMSQEVLPAATAIL
NT seq
2565 nt
NT seq
+upstream
nt +downstream
nt
atggcttccgtcggagcgatcccaggcaggacgccgcagggcccggggcccggggcagcc
tcggccagctttcccagcctggccccggtgccgggccgcggggagtccgaggaggaggag
aacgagcaggagccggcggaggtctctggggcggtgttgtcgcgagcggcaggcgcatgg
atccatctgtgtgtcctgtggacttcgggatacttgggcattgcctattatgacactagt
gactccaccatccacttcatgccagatgccccagatcacgagagtctcaagcttctccag
agagtgttggatgaaatcagtccccggtctgttgttacgagtgccaaacaggatgagaat
atgactcggtttctagggaagcttgcctcccaggagcacagagagcctaagagacctgaa
atcgtatttttgccaagtgtggattttggtctggagataagtaaacagcgcctcctttct
ggaaactacgccttcattccagactccatgactaccactgagaaaatcctcttcctctcc
tccattattccctttgactgcctcctcacggttcgggcacttggagggttgctcaagttc
ctgggtcgaagaagaattggggttgaactggaagactataacatcagcgtccccatcctg
ggctttaagaaatttgtgttgacccatctggtgagcatagatcaagacacatacagcgtt
ctgcagatatttaagagtgagtcccatccctcagtgtacaaagtggccagcggactgaag
gaggggctcagcctctttggaatcctcaacagatgccgttgtaagtggggagagaagctg
ctcaggctgtggttcacacgtccaactcaggacctgggagagctaaatgctcggttggat
gtcattcagtttttcctcctacctcagaatctggacatagctcaaatgctgcatcggttg
ctgggtcatatcaagaatgtacctctgattctgaaacgcatgaagctgtcccacaccaag
gccagcgactggcaggttctatacaagcccgccttctgtccatttctgctacagactgtg
tacagtgccctgggtctgagggatgcctgccgctccctgccccagtccatccagctcttt
caggacattgcccaagagttctctgacgacctgcaccatatcgccagcctcattgggaag
gtggtggactttgagggcagtcttgctgaaaatcgcttcacagtcctccccaacatagat
cctgacattgatgagaaaaaacgaaggctgatgggacttcccagtttcctcactgaggtc
gcccggaaggagctagagaatctggactcccgtattccttcatgcagtgtcatctacatc
cctttgattggcttccttctctctattccccgcctgccttccatggcagaggccagtgac
tttgagattgaaggactggactttatgtttctgtcagaggagaagctgcactaccgtagt
gctcgaaccaaggagctggatgcattgctgggggacctgcactgtgacatccgggaccag
gagaccctgttgatgtaccagctgcagtgtcaggtgctggcacgggccgctgtcttgacc
cgggtgttggaccttgcctcccgcctggacgtcctgctggctcttgccagtgctgcccgg
gactatggctactcaaggccccgttatgccccccagctcattggggtcagaatccagaat
ggcagacatcctctgatggaactctgtgcccgaaccttcgtgcccaactctgcagaatgt
ggtggggacagagggagggtcaaagtcatcactggacccaattcctcagggaagagcata
tacctcaaacaggtaggcttgatcacattcatggccctggtgggcagctttgtgccagca
gaggaagccgaaattggggctgtagatgccatctttacccgaatccacagctgtgactcc
atctccctgggcctctctaccttcatgatcgacctcaaccagatggcgaaagcagtgaac
aatgccaccaagcagtctctggtcctcattgacgaatttggaaagggaaccaacacggtg
gacgggctcgcacttctggccgctgtcctgagacactggctggcacttggacccacgtgc
cctcacatctttgtggccaccaactttctgagtcttgttcagctccagctgctgccacaa
gggccccttgtacaatatttgaccatggagacctgtgaggatggagacgacctagtcttc
ttctatcaggtgtgtgaaggtattgccaaggccagccatgcctcccacacagctgcccag
gctgggcttcctgaccaactccttactcgtggcaaggaggtctcagacttgatccgcagt
gggaaacctatcaagcctgtcaaggagttgctaaaggagaagcaaatggaaaattgccag
acattagtagataaatttctgaaactggacctggacgatcccaacttggacctggacctt
ttcatgagtcaggaagtgctgcctgctgccactgccatcctttga
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