Mirounga leonina (Southern elephant seal): 118027354
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Entry
118027354 CDS
T07472
Symbol
VARS2
Name
(RefSeq) valine--tRNA ligase, mitochondrial isoform X1
KO
K01873
valyl-tRNA synthetase [EC:
6.1.1.9
]
Organism
mlx
Mirounga leonina (Southern elephant seal)
Pathway
mlx00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
mlx00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
118027354 (VARS2)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
mlx01007
]
118027354 (VARS2)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
mlx03016
]
118027354 (VARS2)
Enzymes [BR:
mlx01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.9 valine---tRNA ligase
118027354 (VARS2)
Amino acid related enzymes [BR:
mlx01007
]
Aminoacyl-tRNA synthetase
Class I (U)
118027354 (VARS2)
Transfer RNA biogenesis [BR:
mlx03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
118027354 (VARS2)
Prokaryotic type
118027354 (VARS2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
tRNA-synt_1
Anticodon_1
tRNA-synt_1g
tRNA-synt_1_2
tRNA-synt_1e
Motif
Other DBs
NCBI-GeneID:
118027354
NCBI-ProteinID:
XP_034886524
LinkDB
All DBs
Position
Unknown
AA seq
1064 aa
AA seq
DB search
MPHLPLASFRSPFWGLRPSQGLPRFHPLSTHSKSHGSSISRRNHEAKQKRQREKQAALEA
GIARKSKSAAESSKAWTPKEVVVYEIPTEPGEKKDVSGLLPPAYSPRYVEAAWYSWWVRE
GFFKPEYQMKLPQATGETFSMCIPPPNITGSLHIGHALTVAIQDALVRWHRMCGDQVLWV
PGSDHAGIATQAVVEKQLWKERGVRRHELSREEFLREVWKWKEEKGGEISEQLQALGASL
DWDRECFTMDAGSSVAVTEAFVRLYEAGLLYRSQQLVNWSCALRSAISDIEVESRPLPGR
TELRLPGCPTPVSFGLLFSVAFPVDGEPGEDAEVVVGTTRPETLPGDVAVAVHPDDSRHA
HLHGRQLRHPLTGQLLPLITDCAVQPHVGTGAVKVTPAHSPADAELGARHGLSPLSVISE
DGTMTSLCGDWLQGLHRFVAREKIMSALTERGLFRGLQNHPMVLPICSRSGDVVEYLLKS
QWFVRCQELGARAAQAVESGALELSPSFHQKNWQHWFSHIGDWCVSRQLWWGHRIPAYLV
VEEHTKGDEEDCWVVGRTEAEARKIAAELTGKPGAELTLQRDPDVLDTWFSSALFPFAAL
GWPQETPDLARFYPLSLLETGSDLLLFWVGRMVMLGTQLTGQLPFSKVLLHSMVRDRQGR
KMSKSLGNVLDPRDIISGVELQVLQAKLRDGNLDATELVIAAAAQRKDFPHGIPECGTDA
LRFALCSHGALGGDLHLSVSEVLSSRHFCNKIWNALRFILNALGEQFVPQPAEELSPSSP
MDAWILSRLAHTARECERGFLARELSLTTHALRHFWLHSLCDVYLEAVKPVLSRSPHPPG
PPQALFSCADTGLRLLAPLMPFLAEELWQRLPPRPGGNSAPSISVAPYPTARSLGHWHQP
ELEQRFSRVQEAVQALRALRATYQLTKARPRVLLQSSEPGEQGLFEAFLEPLGTLGHCGA
VGLLPPGVAAPSGWAQAPLSDTTQMYMELQGLVDPQTHLSLLAARRHKLQKQLDGLMAWT
PSEGEAETKRQQRLSSLQLELSKLDKAASHLRQLMDACPSPGEL
NT seq
3195 nt
NT seq
+upstream
nt +downstream
nt
atgcctcatttgcctttggcctcttttcgatcaccattctgggggctgaggccctcacag
ggcctccccaggttccatcccctctctacccactcaaagtcccatggatcctccatctcc
cggaggaaccatgaagccaaacagaagcgccagcgagagaagcaggcggcgctggaggct
gggatagcccgaaagagcaagtcagctgcagaatccagtaaggcctggactcctaaggag
gtggtggtgtatgaaatccccacggaacctggtgaaaagaaagatgtctccgggctcctg
cctcctgcatacagccctcggtatgttgaggctgcctggtactcttggtgggtgcgagag
ggcttcttcaaaccagagtatcagatgaagctgccccaggctacaggggagaccttttcc
atgtgtatcccacctcccaatatcaccggctccctacatatcgggcatgcactgacggtg
gccatacaggatgccctggtgcgctggcaccggatgtgtggggatcaggtgctgtgggtc
cctggctccgatcacgcaggaattgctacacaggctgtggtggagaagcaactgtggaag
gagcgaggagtgaggagacatgagctgagccgggaggaattccttagggaggtgtggaag
tggaaggaggagaaaggtggagagatcagtgagcagctccaagctctgggggcctcccta
gactgggaccgagagtgcttcactatggatgctggctcctcggtggctgtgaccgaagct
tttgtgcgactctacgaggcggggttgttgtaccggagccagcagcttgtcaactggtcc
tgtgctttaagatcagccatctcggatattgaggtggagagccggcccctgcctggccgc
acggagcttcgactgcctggctgccccacccctgtgtcttttggcctccttttttctgtg
gccttccctgtggatggagagcctggtgaggacgcagaggttgtggtgggaaccacaagg
ccagagacattacctggagacgtggctgtggctgttcatcctgacgactcccgacacgcg
catctgcatgggcgacagcttcgtcaccccttgaccgggcagcttctccccctcatcaca
gactgtgctgttcagccacatgtgggcacaggggcagtgaaggtgactccagcgcatagc
cctgcagatgctgagctgggggcgcggcacggcttgagccccctgagcgtcatctcagag
gatgggaccatgacctccctctgtggggactggctacagggtcttcaccgatttgtggcc
cgagaaaagattatgtctgcgctgacagagcggggcctgttccggggcctccagaaccac
cccatggtgcttcctatttgcagccgttctggggacgtggttgaatacctgctgaagagc
cagtggtttgtccgctgtcaggagctgggggcccgagctgcccaggctgtggagtcaggg
gctctggagctcagtccatccttccaccagaagaactggcagcactggttttcccacatc
ggggactggtgtgtctcccggcagctgtggtggggccatcggattcccgcctacctggtg
gtagaggagcacacgaagggtgatgaggaggactgttgggtggtcgggcggacagaggct
gaggccagaaaaatagctgcagaactgacagggaaaccaggagcagagctgaccctgcag
agggatcctgatgtcctggacacatggttctcttcagctcttttcccctttgctgccctg
ggctggccccaagagaccccagaccttgctcgtttctaccccctgtcacttttggaaacg
ggcagtgaccttctgttgttctgggtgggccgcatggtcatgttggggacccagctcaca
gggcagctccccttcagcaaggtgcttcttcattccatggttcgggacaggcagggccgg
aagatgagcaagtccctggggaatgtgttggacccacgagacatcatcagtggggtggag
ctgcaggtgctgcaggcgaagctgagggatgggaacttggacgccacagagctggtgatc
gcggccgcagcgcagagaaaggacttccctcatgggatccctgagtgtgggacagatgcc
ctgcggtttgccctgtgctcccacggggccttggggggcgatttgcacctgtctgtctct
gaggtcctgagttcccggcatttctgcaacaaaatctggaatgccctgcgctttatcctc
aatgccttaggggagcaattcgtaccccagcctgcagaggagctgtccccctcgtctccg
atggatgcctggatcctgagccgtcttgcccatactgcccgggagtgtgagcgaggcttc
cttgctcgagagctctcactcactacgcatgccctgcgccacttctggctgcacagcctc
tgcgatgtctacctggaggctgtgaagccagtgctgtcgcgctcgccccatcccccgggc
ccccctcaggccctgttctcttgtgccgacaccgggctccgcctcctcgccccactgatg
cccttcctggctgaggagttgtggcagaggctgccgcccaggcctggcggcaactctgcc
cccagcatctccgttgccccctaccccactgcccgcagcctggggcactggcaccagccc
gagctggagcagcgcttctcccgggtccaggaggctgtgcaggcactgagggctctccga
gccacataccagctcaccaaggcccggccccgagtgctgctgcagagctcagagcctgga
gagcagggcctcttcgaggccttcctggagcccctgggcaccctgggccactgtggggcc
gtgggcctcttacccccaggtgtggcggcgccctccggctgggcccaggccccactcagt
gacaccactcagatgtacatggagctgcagggcctggtggacccccagacccatctgtct
ctgctggctgcccgaagacacaagttgcaaaagcagcttgatggcctcatggcctggacc
ccatcagagggagaggcagagactaagaggcagcagaggctttcttccctccagttggaa
ttgtcgaagctggacaaggcggcctctcacctccggcagctgatggatgcgtgtcccagc
cccggggagctctga
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integrated database retrieval system
