Micrococcus lylae: CJ228_001290
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Entry
CJ228_001290 CDS
T09111
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
mly
Micrococcus lylae
Brite
KEGG Orthology (KO) [BR:
mly00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
mly03016
]
CJ228_001290 (truB)
Enzymes [BR:
mly01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
CJ228_001290 (truB)
Transfer RNA biogenesis [BR:
mly03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
CJ228_001290 (truB)
Prokaryotic type
CJ228_001290 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB_C
SBP_bac_11
DKCLD
Motif
Other DBs
NCBI-ProteinID:
WIK82489
LinkDB
All DBs
Position
286983..287966
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AA seq
327 aa
AA seq
DB search
MSSQRTAAAPDAPGTEASGVVLVDKPGGWTSHDVVGRIRRLAGTRKVGHAGTLDPMATGL
LVVGVNKATRLLTSITGTDKVYEATVRLGVSTVTDDAEGEVLQTRLANAVTEERVAEQVA
ALTGDIEQVPSAVSAVKVAGRRAYDRVRAGEDVKLDARPVTVHSFDVLEMRRLDDGRVVD
LHVRVHCSSGTYIRALARDLGEALEVGGHLTMLRRTRVGPFDVADAHSLEALAERFAMTE
LSAAVADLFPVREVSDAEAEELSFGRAIEPTATGEELTAARRGDGTVVALIKDARRRGQD
IARPHLVFSPSEGPGAAEQDEQKEPRP
NT seq
984 nt
NT seq
+upstream
nt +downstream
nt
gtgagctctcagcgcaccgcagcagcccccgacgccccgggcaccgaggcgtcgggggtt
gtcctcgtcgacaagcccggcggctggacctcgcacgacgtggtcgggcgcatccgccgc
ctggccgggacccgcaaggtcggccacgccggcaccctcgaccccatggccaccggcctg
ctcgtggtcggggtcaacaaggccacccgcctgctgacctccatcaccggcacggacaag
gtctacgaggccaccgtgcggctcggggtgtccaccgtcaccgacgacgccgagggcgag
gtcctgcagacccgcctggcgaacgccgtcaccgaggagcgggtggccgagcaggtcgcc
gccctcaccggggacatcgagcaggtcccctccgccgtgtccgccgtgaaggtggccggc
cgccgcgcctacgaccgcgtccgtgcgggcgaggacgtgaagctcgacgcccgtcccgtc
accgtgcactccttcgacgtgctcgagatgcgccggctggacgacggccgcgtggtggac
cttcacgtgcgcgtccactgctcctccggcacgtacatccgtgccctggcccgcgacctg
ggggaggccctcgaggtcggcggccatctgaccatgctgcggcgcaccagggtcggcccg
ttcgacgtggccgacgcccacagcctcgaggccctcgccgagcgcttcgccatgaccgag
ctctccgcggccgtcgcggacctgttccccgtgcgggaggtctccgacgccgaggccgag
gagctctccttcggccgcgcgatcgagcccacggccaccggtgaggagctcaccgccgcc
cgccgcggcgacggcaccgtcgtcgccctgatcaaggacgcccgccgtcgcgggcaggac
atcgcgcgtccgcacctggtgttctccccgtcggagggcccgggcgccgccgaacaggac
gaacagaaggagccccgcccgtga
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