Micrococcus lylae: CJ228_001960
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Entry
CJ228_001960 CDS
T09111
Symbol
rho
Name
(GenBank) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
mly
Micrococcus lylae
Pathway
mly03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mly00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CJ228_001960 (rho)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mly03021
]
CJ228_001960 (rho)
03019 Messenger RNA biogenesis [BR:
mly03019
]
CJ228_001960 (rho)
Transcription machinery [BR:
mly03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
CJ228_001960 (rho)
Messenger RNA biogenesis [BR:
mly03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
CJ228_001960 (rho)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATP-synt_ab
Rho_RNA_bind
Rho_N
Spore_III_AA
AAA_25
NACHT
CoV_NSP2_C
AAA_22
Motif
Other DBs
NCBI-ProteinID:
WIK83329
LinkDB
All DBs
Position
437475..439508
Genome browser
AA seq
677 aa
AA seq
DB search
MEQTAPSANAGGGLASLKLAQLQALASQLGITGSRRMRKSDLVAAIADHQRGGAVADREA
AEKRAAEKQAAEQKKAAEKAEKDETAQGEQRSERPARRSRRADSDGSAPAEQRGDRKDEQ
SQDEQDSRGRGRRNQGQDETRGEGQDRASGGDREDRGDRSEDEKKSGGHERENGRGDKGG
RSSDEDDRDNGGRNDNGGRNRKRGDRDEDDRDNGGRNRKRGDRDEDDRDNGGRNDNGGRN
DKGGRNRNRGDRDDDERGSRRSRRNRNRNDRNRNRRGRGGPEVDDTELTEDDVLQPVAGI
LDVLDNYAFVRTSGYLPGQNDVYVSLQMVKKYGLRKGDAVVGAIRAPREGEKRNSGGGNR
QKFNALVKLSTVNGAPAEEDPTRVEFSKLVPLYPQERLRLETDHKLVGPRVIDLVSPIGK
GQRGLIVSPPKAGKTMILQSIANAITTNNPEVHLMMVLVDERPEEVTDMQRSVKGEVIAS
TFDRPADDHTTVAELAIERAKRLVELGRDVVVLLDSMTRLGRAYNLAAPASGRILSGGVD
SSALYPPKKFFGAARNIENGGSLTILATALVETGSRMDEVIFEEFKGTGNMELRLSRQLA
ERRIFPAVDVNASGTRREEALLSPEEVKIMWKLRRVLSGLETQQALELLTNKIKDTASNA
EFLMLVSKTTLGSKGDD
NT seq
2034 nt
NT seq
+upstream
nt +downstream
nt
atggaacagaccgccccctccgcgaacgccggcggcggactggcctctctcaagctcgcc
cagctccaggccctggcctcccagctcggcatcaccggcagccgccgcatgcgcaagtcg
gacctggtggccgcgatcgccgaccaccagcgcggcggtgccgtggccgaccgtgaggcc
gcggagaagcgtgcggccgagaagcaggccgccgagcagaagaaggccgccgagaaggcg
gagaaggacgagaccgcgcagggcgaacagcgctccgagcgcccggcccgccgctcccgc
cgcgccgactcggacggctccgcgccggccgaacagcgcggggaccgcaaggacgagcag
agccaggacgagcaggacagccgcggccgtggccgccggaaccagggccaggacgagacc
cgtggcgagggccaggacagggcctccggcggcgaccgcgaggaccgcggcgaccgctct
gaggacgagaagaagtccggcggccacgagcgcgagaacggccgcggggacaagggcggc
cgcagcagcgacgaggacgaccgcgacaacggcggccgcaacgacaacggcggccggaac
cggaagcgcggcgaccgcgacgaggacgaccgcgacaacggcggccggaaccggaagcgc
ggcgaccgcgacgaggacgaccgcgacaacggcggccgcaacgacaacggcggccgcaat
gacaagggcggccggaatcggaaccgcggcgaccgcgacgacgacgagcgcggttcgcgt
cgctcccgccgcaaccgcaaccgcaacgaccgcaaccggaaccgccgcggccgcggcggc
cccgaggtggacgacaccgagctgaccgaggacgacgtcctgcagccggtggccggcatc
ctcgacgtgctggacaactacgccttcgtccgcacctccggctacctgcccggccagaac
gacgtctacgtctccctgcagatggtcaagaagtacggcctgcgcaagggcgacgccgtg
gtcggcgccatccgtgccccgcgtgagggcgagaagcgcaacagcggcggcggcaaccgc
cagaagttcaacgccctggtgaagctgtccaccgtgaacggcgccccggccgaggaggat
ccgacccgcgtcgagttctccaagctggtcccgctgtacccgcaggagcgcctgcgcctg
gagaccgaccacaagctggtcggcccgcgcgtgatcgacctggtcagcccgatcggcaag
ggccagcgcggcctcatcgtctccccgccgaaggccggcaagacgatgatcctgcagtcg
atcgccaacgcgatcaccacgaacaaccccgaggtccacctcatgatggtgctcgtcgac
gagcgcccggaggaggtcacggacatgcagcgttcggtgaagggcgaggtcatcgcctcg
accttcgaccggccggcggacgaccacaccaccgtggccgagctggcgatcgagcgtgcc
aagcgcctcgtggagctgggccgagacgtggtggtcctgctcgactccatgacccgcctg
ggccgcgcctacaacctggccgcgccggcctcgggccgcatcctctccggcggtgtggac
tcctcggcgctgtacccgccgaagaagttcttcggcgccgcccgcaacatcgagaacggc
ggctccctgaccatcctcgccaccgccctggtggagaccggctcccgcatggacgaggtc
atcttcgaggagttcaagggcaccggcaacatggagctgcgcctgtcccgccagctcgcc
gagcgccggatcttcccggcggtggacgtcaacgcgtccggcacccgccgcgaggaggcc
ctgctctcccccgaggaggtcaagatcatgtggaagctgcgccgcgtgctctccggtctg
gagacccagcaggcgctggagctgctcaccaacaagatcaaggacaccgcgtccaacgcc
gagttcctcatgctggtctccaagaccaccctgggctcgaagggcgacgactag
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