Entry |
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Name |
(GenBank) SMC family ATPase
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KO |
K03546 | DNA repair protein SbcC/Rad50 |
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Organism |
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Brite |
KEGG Orthology (KO) [BR:mly00001]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:mly03400]
CJ228_002145
DNA repair and recombination proteins [BR:mly03400]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
CJ228_002145
Archaeal homologous recombinant proteins
CJ228_002145
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SSDB |
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Motif |
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Other DBs |
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LinkDB |
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Position |
474429..477512
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AA seq |
1027 aa
MRIHRIRLTGIGPYAETQDVDFEALNSAGLFLLDGPTGAGKSTILTALCYALYGSVPGGR
SPDSLVTTLRPAGTVAPEVLVEFTVQTRRFEVLRSPRHARPKKRGKGTTMTPASVSLREL
KDGAWTAPLTRADEVGQQIASVMHLDAEQFMQVVMLPQGQFARFLTATSDERRDLLRRLF
GTQRFDGVEEHLKAEADRLDSRAAADRQIAQSAREQLREAAREELGQDWHDPAPYPEDDD
DLLTLVAERADAAHAAAKTRQDEAEAAEKAARTALEQLRRTGQALEAAAGWAVRDEDHRS
KAEATAADRTAVEAHRRAEAVVTAAARAEKAAGAAESAAAQEEAARERAEADATAAGWLA
AARAEQGEVQQGEQAEARETVQEERARKAVRSAVQAGASAAEAVAAALKDRIRIGRLQEQ
QAAAAQRREAIVGERRTAETERDARAEEVAALREEVEAGAAKLGAQDAVDAELAAARARL
KAAETAAARAAELETAEAAHTQARQAEEKAAQRRLDLLRSRYEQAASELAAQLEDGHPCL
VCGSVEHPRPADPVDEDVTEAAVQRAEKALEKASAATGAAAADVTAAQARLHEARTAAGG
LGVDEASEAVSAAEAAKEELAAAKRALAATRRRLTTAQTKQESVAALLAEVATEDGKLEE
QSAQRAERIADLEESVAAAAGEGGDLEARRDAVVAARSLLESLDEALGRRASAGALAAQA
EDALRSALAEKDFADVAAARAARLSPEDAAAKEAAVQAYAREESALAELAATALVAEGRR
LRAEGTQAPDEAQTAAAVERLQAAEAASREQGAVVGSRAALVSAVRRQSAVLREVLGRAA
DLIAEHERVTGLLALVRGSGENRLKMPLTSYVLAGRLEEVAAAASERLRKMTDDRYCLEY
SDAVGGRGNKGLEIVVRDHYVDEVRHPSTLSGGETFMASLSLALGLADTVQAASGGIELD
TLFVDEGFGSLDTETLDEVMGVVDSLRTGGRTVGLVSHVERMKNDIPTRLAVTKHRRGSS
LAVHDGD |
NT seq |
3084 nt +upstreamnt +downstreamnt
atgaggatccaccgcatccgcctcaccgggatcggcccgtacgccgagacccaggacgtg
gacttcgaggcgctcaacagcgccgggctgttcctgctggacggtcccaccggcgcgggc
aagtccaccatcctcaccgcgctctgctacgccctctacggctccgtgccgggcggccgc
tcgcccgattccctggtcaccacgctccgccccgccggcactgtggccccggaagtgctc
gtcgagttcaccgtccagacacggcgcttcgaggtgctccgctcgccccgccatgcgcgt
cccaagaagcggggcaagggcaccaccatgactccggcctccgtgtccctgcgcgagctg
aaggacggcgcctggacggcgccgctgacccgcgcggacgaggtcggccagcagatcgcc
tccgtgatgcacctggacgccgagcagttcatgcaggtcgtcatgctcccgcagggccag
ttcgcgcgcttcctcaccgccacatcggacgagcgtcgggacctgctccgccggctgttc
ggcacccagcggttcgacggcgtggaagagcacctcaaggccgaggccgaccgcctggac
agccgtgcggccgcggacaggcagatcgcgcagagtgcgcgcgagcagctgcgtgaggcc
gcccgcgaggagctcggccaggactggcacgaccccgccccctatccggaggacgacgac
gacctcctgacgctggtcgccgagcgggccgacgccgcccacgccgcggcgaagacccgc
caggacgaggccgaggccgccgagaaggccgcacgcaccgcgctcgagcagctgcgccgc
accggccaggcgctcgaggccgccgcgggttgggcggtccgggacgaggaccatcgctcg
aaggccgaggccaccgccgcggaccggacggccgtcgaggcccaccgccgcgccgaggcc
gtggtcaccgccgccgcccgcgccgagaaggcggcgggcgccgcggagtccgccgccgcc
caggaggaggctgcccgcgagcgggccgaagccgacgccaccgccgccggatggctggcc
gcggcccgcgcggagcagggggaggtgcagcagggcgagcaggcagaggcccgggagacg
gtgcaggaggaacgtgcccggaaggccgtgcgctccgccgtccaggccggcgcctccgcc
gccgaggcggtcgccgcggctctgaaggaccgcatccgcatcggacggctgcaggaacag
caggccgccgccgcgcagcgtcgtgaggccatcgtgggggagcgccggaccgcggagacc
gagcgcgacgcccgggctgaggaggtcgccgcgctgcgggaggaggtcgaggccggcgcc
gcgaagctcggtgcccaggacgccgtggacgcggagctggccgccgcgcgggcccgtctc
aaggcggccgagacggccgctgcccgcgccgccgagctcgagaccgccgaggccgcccac
acccaggctcgtcaggccgaggagaaggccgcccagcggcgcctcgacctgctccggtcc
cgctacgagcaggccgcctccgagctggccgcacagctcgaggacggtcatccctgcctg
gtctgcggctccgtggagcacccccggccggccgaccccgtggacgaggacgtcaccgag
gccgccgtccagcgggccgagaaggccctggagaaggcgtccgccgccaccggcgcggcc
gcggccgacgtgaccgccgcccaggcccgcctccacgaggcgcggaccgccgccggcgga
ctgggcgtggacgaggcctcggaggcggtctcggccgctgaggccgccaaggaggagctg
gccgccgccaagcgtgcactggcggcgacacgccgccgtctgaccacggctcagacgaag
caggagtccgtcgccgcgctcctggccgaggtggccaccgaggacggcaagctcgaggag
cagtccgcccagcgtgccgagcgcatcgccgatctcgaggagtccgtcgccgcggccgcc
ggcgagggcggggacctggaggcgcgccgggacgccgtcgtcgccgcccggtcgctgctg
gagagcctcgacgaggccctcggccgccgtgcctccgccggcgctctggccgcccaggcc
gaggacgcactgcgttcggcgctggcggagaaggacttcgcggacgtggctgcggcccgt
gccgcccgcctctcgcccgaggacgccgccgcgaaggaggccgccgtgcaggcctacgcg
cgcgaggagtccgcgctggccgagctcgccgccaccgccctggtggccgaggggcgccgg
ctccgggcggaggggacgcaggcgccggacgaggcgcagaccgcggccgccgtcgagcgt
ctgcaggcggccgaggccgcctcccgggagcagggggccgtcgtcggctcgcgggccgcc
ctggtgtccgccgtacgccggcagtccgccgtcctgcgcgaggtcctgggccgggcggcg
gacctgatcgccgagcacgagcgcgtcaccggcctgctcgccctggtgcgcggctccggc
gagaaccgcctgaagatgccgctcaccagctacgtgctggccgggcgcctcgaggaggtc
gccgccgcggcctccgaacgcctgcggaagatgaccgacgaccgctactgcctcgagtac
tcggacgcggtcggcgggcgcggcaacaagggcctcgagatcgtcgtgcgcgaccactat
gtggacgaggtccggcacccctccaccctgtccggcggcgagaccttcatggcctccctg
tccctcgccctgggtcttgcggacaccgtgcaggcggcctccggcggcatcgagctggat
acgctcttcgtggacgaggggttcgggtccctggacacggagaccctggacgaggtgatg
ggggtcgtggactccctgcgcaccggcggccgcaccgtcgggctcgtcagccacgtcgag
cgcatgaagaacgacatccccacccgcctggccgtcaccaagcaccgccgcggctcctcg
ctcgccgtccacgacggagactga |