Micrococcus lylae: CJ228_003265
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Entry
CJ228_003265 CDS
T09111
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
mly
Micrococcus lylae
Pathway
mly03030
DNA replication
mly03410
Base excision repair
mly03420
Nucleotide excision repair
mly03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
mly00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
CJ228_003265 (polA)
03410 Base excision repair
CJ228_003265 (polA)
03420 Nucleotide excision repair
CJ228_003265 (polA)
03440 Homologous recombination
CJ228_003265 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mly03032
]
CJ228_003265 (polA)
03400 DNA repair and recombination proteins [BR:
mly03400
]
CJ228_003265 (polA)
Enzymes [BR:
mly01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
CJ228_003265 (polA)
DNA replication proteins [BR:
mly03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
CJ228_003265 (polA)
DNA repair and recombination proteins [BR:
mly03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
CJ228_003265 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
CJ228_003265 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
5_3_exonuc
DNA_polI_exo1
DNA_pol_A_exo1
Motif
Other DBs
NCBI-ProteinID:
WIK82833
LinkDB
All DBs
Position
725993..728788
Genome browser
AA seq
931 aa
AA seq
DB search
MPSDETAAPAAGPHRLLVLDGHSMAFRAFYALPAENFATDTGQHTNAVYGFTSMLLTMIR
QQRPTHVAVAFDLSGPTFRSEEYTEYKAGRSETPEEFHGQIDLIGKVMEALGIPTVTMEG
YEADDIVATLAARADAAGWQTCVVSGDRDAFQLISDTTTVLYPKKGVSDIPPMKAADVEA
KYGVRPELYPDLAALVGEKADNLPGVPGVGAGFAAKWLEKYGDLDGVIAHADEITGKKGQ
ALREHLDDVRRNRRLNALVRDLDLPVTDEAMQLSMPDRASVAELFDALQFNRIRERVFEV
FSERLGADAPADHVEEAPAAVVVTDRAGLEEFVSRHAGSLLGVHVQVDGPALLPRRKVPV
PGEYGVPVTLGLAVEDDAVAVDLTAVGEDLAAAVRELLEDAAVTKAVHDLKRALKALRTA
GVGGQPCDVLGVEDDVFLGAYLIQPDRRDIGLDSLAGEDLHTPLEAPADDDEGPAQGELD
LDGAAGAAEAAARARNAVRAAWIVRRLSEDYTPRLVDRGAQALLREIEIPLSRLLADMEL
EGIAVDREHLEALRADFTAAADAAKESAWASVAEETGGMQVNLGSPKQLQTVLFEHLDMP
KTRKTKTGYSTDVDSLNSLLEQTGHPFLENLMAHRDATKLRQTVDGLLETVAEDGRIHTT
YSQTVATTGRLSSLHPNLQNIPVRTTEGRRIRETFVAGEGNVLLSADYSQIEMRIMAHLS
EDAGLIEAFRTGEDLHDFVGAQVFGCEPSEVTAEQRSKVKAMSYGLAYGLSSFGLSKQLN
IGVDEARTLMKGYFDRFGGVRDYLRHVVAQARRDGFTATIEGRRRYLPDLNSDNRQLRDM
AERAALNAPIQGSAADIIKRAMLDVAAGLAEERLRSRLLLQVHDELILEVPADELEAATA
LLKERMGRAAELSVPLDVHVGQGESWHAAAH
NT seq
2796 nt
NT seq
+upstream
nt +downstream
nt
atgcccagcgacgagaccgccgcgcccgccgcaggaccgcaccgcctgctggtgctggac
ggccactccatggccttccgtgccttctacgccctgcccgccgagaacttcgccacggac
accggccagcacaccaatgcggtctacggcttcacctcgatgctgctgaccatgatccgc
cagcagcggcccacacacgtggcggtcgccttcgacctgtccggcccgacgttccgctcc
gaggagtacacggagtacaaggccggccgctccgagactccggaggagttccacggccag
atcgacctgatcggcaaggtcatggaggccctcggcatccccaccgtcaccatggagggc
tacgaggccgacgacatcgtggcgaccctggccgcccgcgccgacgccgccggctggcag
acctgcgtggtctccggcgaccgggacgcgttccagctcatctccgacaccaccaccgtg
ctctacccgaagaagggcgtctccgacatccctccgatgaaggccgcggacgtggaggcc
aagtacggcgtgcggccggagctctacccggacctcgcggcgctggtgggcgagaaggcg
gacaacctgcccggcgtccccggcgtgggtgccggcttcgccgccaagtggctcgagaag
tacggggacctggacggcgtgatcgcccacgcggacgagatcaccggcaagaagggccag
gccctgcgggagcacctggacgacgtgcgccgcaaccgccgcctcaacgcgctcgtgcgg
gacctggacctgccggtgaccgacgaggccatgcagctgtccatgccggaccgcgcttcg
gtggccgagctcttcgacgccctgcagttcaaccgcatccgcgagcgcgtcttcgaggtg
ttctccgagcgcctcggggccgacgcacccgccgatcacgtcgaggaggcccccgctgcc
gtggtggtcacggaccgggccgggctcgaggagttcgtctcccgccacgccggctccctg
ctcggcgtccacgttcaggtggacggtcccgcgctgctgcccaggcgcaaggtcccggtg
ccgggggagtacggcgtgcccgtgaccctcggcctggccgtcgaggacgacgccgtcgcg
gtggacctcacggccgtcggcgaggatctcgccgccgccgtccgcgagctgctcgaagac
gcggccgtcaccaaggccgtccacgacctcaagcgtgccctcaaggccctgcgcaccgcc
ggcgtgggcgggcagccctgcgacgtgctcggcgtggaggacgacgtcttcctcggcgcc
tacctgatccagccggaccgccgggacatcggcctggactccctggcaggcgaggacctg
cacaccccgctcgaggcgccggccgacgacgacgagggcccggcccagggcgagctcgac
ctggacggcgccgccggcgccgccgaggcggcggcccgcgcccgcaacgccgtgcgcgcc
gcctggatcgtccgccgcctgtccgaggactacaccccgcgcctggtggaccgcggcgcc
caggcgctgctgcgcgagatcgagatcccgctgtcccgactgctggcggacatggagctc
gagggcatcgccgtggaccgcgagcacctcgaggccctgcgcgccgacttcaccgcggcc
gccgacgccgccaaggagtccgcctgggcgtccgtggcggaggagaccggcggaatgcag
gtcaacctcggctcgcccaagcagcttcagaccgtgctgttcgagcacctggacatgccg
aagacccgcaagacgaagacgggctactccacggacgtggactccctgaactcgctgctg
gagcagaccggccacccgttcctggagaacctcatggcccaccgcgacgccaccaagctg
cgccagaccgtggacggcctgctggagaccgtggcggaggacggccgcatccacaccacc
tactcgcagaccgtggccaccaccggccggctgtcctctctgcacccgaacctgcagaac
atcccggtccgcaccacggagggccgccgcatccgcgagaccttcgtggccggcgagggc
aacgtgctgctctcggcggactactcccagatcgagatgcggatcatggcgcacctgtcc
gaggacgccggcctgatcgaggcgttccgcaccggcgaggacctccacgacttcgtgggc
gcccaggtgttcggctgcgagccgtccgaggtgaccgccgagcagcgctccaaggtcaag
gccatgagctacggcctggcctacggcctgtcctcgttcggcctgtccaagcagctgaac
atcggcgtggacgaggcccgcacgctgatgaagggctacttcgaccgcttcggcggcgtc
cgcgactacctccgccacgtcgtggcacaggcccgccgggacggcttcaccgccaccatc
gagggccgccggcgctacctgccggacctgaactcggacaaccgccagctgcgggacatg
gccgagcgcgcggccctcaacgctcccatccagggctcggcggccgacatcatcaagcgc
gccatgctggacgtcgccgccggcctggccgaggagcggctgcgatcccgcctgctgctg
caggtgcacgacgagctcatcctggaggtccccgctgacgagctggaggccgccaccgca
ctgctgaaggagcgcatgggccgggccgccgagctgtccgtgccgctggacgtccacgtc
ggacagggggagagctggcatgccgcagcacactga
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