Micrococcus lylae: CJ228_003955
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Entry
CJ228_003955 CDS
T09111
Symbol
holA
Name
(GenBank) DNA polymerase III subunit delta
KO
K02340
DNA polymerase III subunit delta [EC:
2.7.7.7
]
Organism
mly
Micrococcus lylae
Pathway
mly03030
DNA replication
mly03430
Mismatch repair
mly03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
mly00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
CJ228_003955 (holA)
03430 Mismatch repair
CJ228_003955 (holA)
03440 Homologous recombination
CJ228_003955 (holA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mly03032
]
CJ228_003955 (holA)
03400 DNA repair and recombination proteins [BR:
mly03400
]
CJ228_003955 (holA)
Enzymes [BR:
mly01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
CJ228_003955 (holA)
DNA replication proteins [BR:
mly03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
CJ228_003955 (holA)
DNA repair and recombination proteins [BR:
mly03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
CJ228_003955 (holA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta_C
DNA_pol3_gamma3
Motif
Other DBs
NCBI-ProteinID:
WIK82962
LinkDB
All DBs
Position
complement(894326..895348)
Genome browser
AA seq
340 aa
AA seq
DB search
MAAARSSRTARSRAAANPLAWRQARPGPLMLLKGPEDYAARWVTDQVVKGLKQRHEAVET
HRFRAAEYQPGQLAMAASPSLFAEPTLIIAEGLESMNDAFLTDALDLVTSGPPADDVTVV
LRHTGGSRGKKLLDAVATVGTVVECAALKKDEDKIAFVYAEFKDHRRRIDEEAARALVQA
TGASLTDLASACHQLLADTEGAVTRQVVDQYYGGRVEATSFAVADAALEGQAARAVALTR
HALATGVHPVMLTTALAMKARQVARVIDSRDAPNELAAALGVAPFQMKFIQQAARHWSPA
GIAHAMEWIAQADAEVKGGSRNPDFAVERAVIRVSTGTRR
NT seq
1023 nt
NT seq
+upstream
nt +downstream
nt
atggccgcagcccgctcctcccgcaccgcccggtctcgcgccgccgcgaacccgctggcc
tggcgccaggcccggcccgggccgctgatgctgctcaagggccccgaggactacgccgcc
cgctgggtcaccgaccaggtggtgaagggtctcaagcagcgccacgaggccgtcgagacc
caccgcttccgcgccgccgagtaccagccgggccagctggccatggccgcgagcccctcg
ctgttcgccgagcccacgctgatcatcgccgaaggcctggagtccatgaacgacgcgttc
ctcacggacgccctggacctggtgacctccggcccgccggccgacgacgtcaccgtggtc
ctacgccacaccggcggcagccgcggcaagaagctgctggacgccgtcgcgacggtgggc
accgtggtggagtgtgcggcgctgaagaaggacgaggacaagatcgccttcgtctacgcc
gagttcaaggaccaccggcgccgcatcgacgaggaggccgcccgcgcgctcgtgcaggcc
accggcgcctcgctcaccgacctggcctccgcctgccaccagctgctcgcggacaccgag
ggcgcggtgaccaggcaggtggtggaccagtactacggaggccgcgtggaggccaccagc
ttcgccgtggccgatgccgcgctggaggggcaggccgcccgcgccgtcgcgttgaccagg
cacgccctggccaccggcgtccacccggtgatgctgaccacggcgctggccatgaaggcc
cgtcaggtcgcccgcgtcatcgactcccgggacgcccccaacgagctcgccgccgctctt
ggtgtggccccgttccagatgaagttcatccagcaggccgcccgccactggagccccgcc
gggatcgcgcacgcgatggagtggatcgcccaggccgatgccgaggtcaagggcggctcc
cgcaacccggacttcgccgtcgagcgcgcggtgatccgcgtctccaccggcacccgccgc
tga
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