Micrococcus lylae: CJ228_004215
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Entry
CJ228_004215 CDS
T09111
Name
(GenBank) HRDC domain-containing protein
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
mly
Micrococcus lylae
Brite
KEGG Orthology (KO) [BR:
mly00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
mly03016
]
CJ228_004215
Enzymes [BR:
mly01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
CJ228_004215
Transfer RNA biogenesis [BR:
mly03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
CJ228_004215
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
DNA_pol_A_exoN
HRDC
Motif
Other DBs
NCBI-ProteinID:
WIK83011
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All DBs
Position
960586..961878
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AA seq
430 aa
AA seq
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MTRTPSSRSPQKHDGGSPAATQTAASEAPRLITEPADGVPLLTDTPGGLAACAEALSGGT
GPVAVDAERASGIRYGQRAFLVQLKRTGSGIWLIDPEAFDDLSPLVAALKGVEWILHAST
QDLPCLSELGLWPDRLFDTELAARLAGLPRVGLAAVLEQMLGVTLAKEHSAADWSTRPLP
ESWLTYAALDVELLVELREALLALLESQGKREWAEQEFEHIRTTPVPGPREDPWRRTSGA
HALKSRTQLAVLRELWQARDDLARHRDIAPGRLLPDSAIVAAAKAQPRTVPQLRATQGFH
GRAAGREAARWVAAIKAGRDRAADGDAPEVHRRGRGDGPPQPRLWKDRSPEADARLRTAK
PWVARHAAEIGMPTENLLTPDTLRRICWNPPAVVTPESVAEALAELGARPWQVEQTAAIL
TVSFLNPMPV
NT seq
1293 nt
NT seq
+upstream
nt +downstream
nt
atgacccgcaccccctccagccgttcgccgcagaagcacgacggcggctcccccgccgcg
acgcagaccgccgcctccgaggcgccccgcctcatcaccgagccggccgacggggtcccc
ctgctgaccgacacccccggcggtctggccgcctgcgcggaggccctgtccggcggcacc
ggacccgtggccgtcgacgccgagcgcgcctccggcatccgctacggccagcgcgccttc
ctcgtgcagctcaagcgcaccggctccggcatctggctgatcgacccggaggcgttcgac
gacctgtccccgctcgtggcggcgctgaagggcgtcgagtggatcctgcacgcctccacg
caggacctgccctgcctgtccgagctgggcctctggccggaccggctcttcgacaccgag
ctcgccgcccgtctggccggactgccccgtgtgggccttgccgcggtcctcgagcagatg
ctcggcgtgaccctggccaaggagcactcggccgcggactggtccacccgaccgctgccc
gagtcctggctcacctacgccgccctcgacgtggagctgctggtggagctgcgcgaggcc
ctgctcgcgctgctcgagtcccagggcaagcgcgagtgggccgagcaggagttcgagcac
atccgcaccacccccgttcccggaccgcgtgaggacccgtggcgccgcacctccggagcg
cacgcgctcaagagccgcacccagcttgccgtgctgcgcgagctctggcaggcccgcgac
gacctggcccggcacagggacatcgcccccggccgcctgctccccgactcggcgatcgtg
gccgcggcgaaggcccagccgcgcaccgtcccacagctgcgcgccacccagggcttccac
ggccgcgccgccggtcgggaggcggcccggtgggtggcggcgatcaaggccggtcgggac
cgcgccgccgacggcgacgccccggaggtgcaccgccgcggccgtggcgacggtcccccg
cagccccgcctgtggaaggaccgcagcccggaggccgacgcgcgcctgcgcaccgccaag
ccctgggtcgcccggcacgccgccgagatcggcatgcccaccgagaacctgctcaccccg
gacaccctgcgtcggatctgctggaacccgccggcggtcgtgaccccggagtcggtggca
gaggccctcgccgagctcggcgcccgcccctggcaggtcgagcagaccgccgcgatcctc
acggtctccttcctcaaccccatgccggtctga
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