Micrococcus lylae: CJ228_005215
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Entry
CJ228_005215 CDS
T09111
Name
(GenBank) ATP-dependent DNA helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
mly
Micrococcus lylae
Pathway
mly03420
Nucleotide excision repair
mly03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
mly00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
CJ228_005215
03430 Mismatch repair
CJ228_005215
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mly03400
]
CJ228_005215
Enzymes [BR:
mly01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
CJ228_005215
DNA repair and recombination proteins [BR:
mly03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
CJ228_005215
MMR (mismatch excision repair)
Other MMR factors
CJ228_005215
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
PDDEXK_1
AAA_19
UvrD_C_2
AAA_30
TetR_C_7
DUF3653
Motif
Other DBs
NCBI-ProteinID:
WIK83195
LinkDB
All DBs
Position
complement(1205765..1209400)
Genome browser
AA seq
1211 aa
AA seq
DB search
MTDAPSTTAGRPGGGTAQSSPAPSSPAQTVEQPMQIRYSPDELARLLATEAEQEAGTWLR
PTAQQAEVIQAPLTPRLVVAGAGSGKTATMADRVVWLVANGLVRPDQVLGVTFTRKAAGE
LAHRINGRLERLLAVPGFEIPGFEGTAEELGRAAVSTYHSYAGALVRDHGLRIGVEPGAV
QITDADAYRMMRQIAEDADVDLQEGAPALSTLVSGALGLAGDMAEHLVEPDAVRDYLAAE
IAHGASLPPTRAGAARNKEAGELLFSLRARLLMAHMVEAYTAAKEEAEVMDFGDLLRHAA
RIAADVPEVGHIERDRYRVVLLDEFQDTSHAQMTIFAGLFGASSGEGVGHCVTAVGDPHQ
SIYGFRGASAGQLFDFPHRFPARDEDARQAPGADPAAADGEAQTGEGAVVGRLRPADVSH
LTTAWRNDESILALANRIVAPMAQPETDTVQVQPLQSRPGASAGEVRLDEYVTGEEEAAD
LVARMQRLADDAGDGPVPSRAILCRGRAQFGPVIDALEAAGAPYQVLGLNGLLSLPEVAE
VLAVLHVVAEPGRSDHLVRWLSGPRWRIGPADLALLKERARFVARLRTRQSDEEAARLED
TSPEEDADTAVLLEALDDLPRESSRWTGRDGRTFSAEGLRRLTAARDMLRRLARRTDMDP
AEMIGEVERATGLDVELALRPGPSAVAARRHLNAFIDTARQFGRRAVGRTVDLAGFLAWV
ESAAEHEKGLGIENAEPDPRAISVLTAHASKGLEWDVVAVPGLVRGAFPSTRADRWMALG
AGALPWPLRGDRNALPQWDHSWAENDRDWVQSSGTVKAKAALELLGSRPDFATLLTEHAL
RDERRLAYVAFTRARSRLWLSTCQWKGTNKTPVEVSEFFAEAAELAEDGPTPVAGVGWGT
RLTDQQRTDANPTAGRMRAALWPFDPLEGPIAYDVDPDDPEDREAWTELPRRSRGRRAAV
EAAAAAVRGADPADLDLDSALGAQLEWAVLRERALQDASGEVALPQHLSVSLYGELAKDP
EAVAEQLRRPMPRPPAHAARRGTAFHAWLEDRFEATGMLDIDDPDDAADQWMDDALDLEP
MQQWFLSSRWADRTPAQVEAPLETTVAGVTLRGRVDAVYRSGGDPADPFDPQAQWELVDW
KTGRVPTGRDLENKALQLAVYRLAFSRLHGIPLENIGASFVYIAHGEERTMEALPGEEEL
ERILREALGSP
NT seq
3636 nt
NT seq
+upstream
nt +downstream
nt
gtgaccgacgcccccagcaccaccgccggccgcccgggcggcggcacagcccagagcagc
ccagcaccgagcagcccagcccagaccgtggagcagcccatgcagatccgctacagcccc
gacgagctcgcccgcctcctggccaccgaggccgagcaggaggccggcacctggctgcgg
cccaccgcccagcaggccgaggtcatccaggcgccgctcacgccgcgcctggtggtggcc
ggcgccggctccggcaagaccgccaccatggccgaccgcgtcgtctggctcgtggccaac
ggactcgtccgcccggaccaggtcctcggcgtcaccttcacccgcaaggccgccggcgag
ctcgcccaccgcatcaacggccgcctcgagcggctgctcgccgtgcccggcttcgagatc
cccgggttcgagggcactgccgaggagcttggccgcgccgccgtctccacctaccactcc
tacgccggcgccctcgtccgggaccacgggctgcgcatcggcgtcgaacccggtgccgtg
cagatcaccgacgccgacgcgtatcggatgatgcggcagatcgccgaggacgcggatgtg
gacctgcaggagggtgcacccgccctgtccacgctcgtctccggcgcgctcggcttggcc
ggggacatggccgagcacctcgtcgagcccgacgccgtccgcgactacctggccgccgaa
atcgcccacggcgcctccctgccgccgacccgtgccggggccgcccgcaacaaggaggcc
ggcgagctgctcttctccctgcgggcccggctgctcatggcgcacatggtcgaggcctac
acggccgccaaggaggaggccgaggtcatggacttcggcgacctgctccgccatgctgcc
cgcatcgccgccgacgtccccgaggtcggccacatcgagcgagaccgctatcgagtggtc
ctgctggacgagttccaggacacatcccacgcccagatgacgatcttcgcagggctcttc
ggcgcgtcctccggcgagggcgtcggccactgcgtcaccgccgtcggcgacccccaccag
tccatctacggattccgcggcgcctccgccgggcagctcttcgacttccctcaccgcttc
ccggcgagggacgaggacgcgcggcaggcgcccggcgccgacccggccgccgcggacggc
gaggcgcagacgggggagggggccgtcgtcgggaggctgaggccggcggacgtgtcccac
ctgacgaccgcctggcgcaacgacgagtcgatcctcgccctggccaaccggatcgtggcg
cccatggcccagccggagacggacaccgtccaggtgcaacccctgcagtcgcgccccggc
gcctccgccggcgaggtccgcctggacgagtacgtgaccggcgaggaggaggccgccgac
ctcgtcgcccggatgcagcggctcgccgacgacgccggcgacggccccgtgccctcgcgg
gcgatcctctgccgcggacgcgcccagttcggcccggtgatcgacgcgctcgaggccgcc
ggcgccccctaccaggtcctcgggctcaacggcctgctgtccctgcccgaggtcgccgag
gtcctcgccgtcctgcatgtggtggccgagcccggccgctccgaccacctcgttcgctgg
ctctccggcccgcgctggcgcatcggcccggccgacctggcgctgctgaaggaacgcgcc
cgcttcgtcgcccggctgcgcacgcgccagagcgacgaggaggccgcccgcctcgaggac
accagcccggaggaggacgcggacaccgccgtgctgctcgaggccctggacgacctgccc
cgcgagtcgagccgctggaccggccgcgacgggcgcaccttctccgccgaggggctgcgc
cggctcaccgccgcccgggacatgctccgccgcctggcccgccgcacggacatggacccg
gccgagatgatcggcgaggtcgagcgcgccaccggcctggacgtcgagctcgccctgcgc
cccggaccctccgccgtggccgcccggcggcacctgaacgccttcatcgacaccgcccgg
cagttcggtcgccgcgccgtcggacgcaccgtggacctggccggattcctcgcctgggtc
gagtccgccgccgagcacgagaagggcctgggcatcgagaacgccgagccggacccgcgc
gcgatctccgtcctcaccgcccacgcctccaagggcctggagtgggacgtcgtggccgtg
cccggcctggtgcgcggcgccttcccctccacccgtgccgaccgctggatggccctcggc
gccggcgcccttccgtggcccctgcgcggagaccggaacgccctcccgcagtgggaccac
tcgtgggccgagaacgaccgcgactgggtgcagagctccgggaccgtgaaggccaaggcc
gccctcgagctgctcggctcccgcccggacttcgccaccctgctcaccgagcacgcgctc
cgggacgagcggcgcctggcctacgtggccttcacccgcgcccgcagccgcctctggctg
agcacctgccagtggaaggggaccaacaagacgcccgtggaggtctccgagttcttcgcc
gaggccgccgagctcgccgaggacggccccacaccggtcgccggcgtcggctgggggact
cgcctcaccgaccagcagcggaccgacgccaaccccaccgccggccgcatgcgggcggcc
ctctggccgttcgacccgctcgagggcccgatcgcctacgacgtggacccggacgacccc
gaggaccgcgaggcctggaccgagctgccgcgccgttcccgcggacgccgcgcggccgtc
gaggccgccgccgctgccgtgcgcggagccgatcctgccgacctggacctggactcggcg
ctcggcgcccagctggagtgggccgtgctgcgcgagcgcgccctgcaggacgccagcggc
gaggtggccctgccgcagcacctgtccgtctccctgtacggcgagttggcgaaggacccg
gaggccgtggctgagcagctgcgcaggccgatgccccgcccgccggcccacgccgcccgc
cgcggcaccgccttccacgcctggctcgaggaccgcttcgaggccaccggcatgctggac
atcgacgacccggacgacgccgccgaccagtggatggacgacgccctcgacctcgagccg
atgcagcagtggttcctgtcctcccgctgggcggaccggactcccgcccaggtggaggcg
ccgctggagaccacggtggccggagtgaccctccgcggccgcgtggacgccgtctaccgc
tccggaggagacccggccgaccccttcgacccgcaggcgcagtgggagctcgtggactgg
aagaccggccgggtccccactggccgggatctggagaacaaggcgctgcaactggccgtc
taccggctggccttctcacggctccacgggatcccgctggagaacatcggcgccagcttc
gtctacatcgcccacggcgaagagcgcaccatggaggcgctccccggggaggaggagctg
gagcggatcctgcgtgaggcgctgggcagcccctga
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