Micrococcus lylae: CJ228_005220
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Entry
CJ228_005220 CDS
T09111
Name
(GenBank) PD-(D/E)XK nuclease family protein
Organism
mly
Micrococcus lylae
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PDDEXK_1
UvrD-helicase
AAA_19
AAA_30
UvrD_C
DEAD
AAA_22
AAA_11
DASH_Dad2
Motif
Other DBs
NCBI-ProteinID:
WIK83196
LinkDB
All DBs
Position
complement(1209397..1213002)
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AA seq
1201 aa
AA seq
DB search
MDQSTEHPAPPNVADHPAADDVQEVAALRQEQRQAWEESWAETSTVEGTVAARLRGPDTA
KTGPGAFAEEQEAVASLTAGHGAVLLLGGPGTGRTATLVEAVARRLEAGLDPESVLVLAP
TRQAAARLRDALTVRLEATGHGTRAVTPVRTWSSYAFDLIRRARVDGPLRHLARPPRLLS
GAEQDTVIAELLDGYAEGTAVGPDWPPSVSEAVGTRGFRREVRELVDRMSEFGVEPGDLQ
ELGARHGRPEWEAAAILVQDYRDRIDLGMAEAFDPAGLISAAVRVLTDVDPDDPERAAAT
EAFAAAERRRLRLVVVDDLQEATPAVHDLLAVIARGTDALLAASPDTTVQGFRGAVPAEV
GSYPARLDEEGGPRPAAERIHVLTQGHRMSAPVLEAWERVARRVATASADLARVRGLTRA
AEDRTDDGTEGPDVTEGPDSTEGPDSTEGPDNTEGPDSTEGPDGGQIPAPAAEVHVVPTA
AHEDRLVLQRVLQVHHGQGVPLDEIAVIARAGSRVAEITAFLESEGVPVVRDVAGTVLKD
EPAVAPLLHLLTVVAALVDEDGRDTAEEDRQDVLADVLDSLDVQHLLRGRYGSTTPLHLR
RLRQDLLATERARGGRRRSEVLLPAALLDPSLLGEEAPRHHGLQRLSRMLHAGLDAARQE
GATAETVLWAVWEAAERGEAWRRLALGKTDRPDAAREGRRADADLDAVVALFQMVERYVD
QFPGAAPAAFSRYMESQDLPMDSLARGASGRDAVHVLTPASAAGRGWHTVLVVGIQDGVW
PNTRLRGQLLGATDLADLVLHRQGAAWPTPHRIRLQETRQDELRTFAAAVSRARHTVVGT
AVVNHEAAPSEFLELIARPERTEKGELVCTEVPDPLTTGALVARMRRSLEEGEGKDGAEA
AGGLAWLAAQGVEAAHPDHWWGLAPLSSQEPVVDPAGEVRLSPSRAQMLLQNPLDWIMSQ
AGAEATTTLAQSVGTFVHSVCEAHPAGPPEALRDEVERRLPELGLPAGWTGEVQLERVRE
LVETFIRYLPESRDAGRVCVAQEIRIDVPVPLADVTVRITGVIDRLEVDAEGRPYVIDLK
TGRSTPTQKEMLRQPQLAAYQVALAAGALTAEGVEVPGVSRPTEPGGAGLVQLGAGTKKV
KVQDQPALGEDDEWAWAQLALAAGRTVGPFYLTLHGTGDRCRHAALCPLCSEGRQVTEWT
R
NT seq
3606 nt
NT seq
+upstream
nt +downstream
nt
atggaccagagcaccgagcaccccgccccgccgaacgtcgccgaccatccggccgcggac
gacgtgcaggaggtcgccgccctgcggcaggagcagcggcaggcgtgggaggagtcctgg
gcggagacgtccaccgtcgagggcaccgtggcggcccggctgcgcggaccggacaccgcg
aagacgggtccgggagccttcgccgaggagcaggaggccgtcgcctcgctcaccgccggg
cacggcgccgtcctgctgctcggcggcccgggcaccggtcgcaccgcgacgctcgtggag
gccgtcgcccgccggctcgaggcggggctggacccggagtccgtgctcgtgctcgcaccg
acccgccaggccgcggctcgcctgcgggacgccctgaccgtgcgcctcgaggccaccggc
cacggcacgcgcgccgtcacaccggtgcgcacctggtcctcctacgcgttcgacctgatc
cgccgcgcccgtgtggacggccccctacggcacctggcccggccgccgcgcctgctctcc
ggcgccgagcaggacaccgtgatcgccgagctgctggacggctacgcggagggcaccgcg
gtgggtccggactggccgccgtccgtgtccgaggccgtcggcacccgcggcttccgccgc
gaggtccgcgagctcgtggaccgcatgagtgagttcggcgtggagccgggggacctgcag
gagctgggcgcccggcacggccgacccgagtgggaggccgccgcgatcctcgtgcaggac
taccgcgaccgcatcgacctgggcatggccgaggcgttcgaccccgccggtctgatctcc
gcagccgtccgcgtgctcacggacgtggacccggacgacccggagcgtgccgcagccacg
gaggccttcgccgcagccgagcgccggaggctgcggcttgtggtggtggacgacctgcag
gaggcgaccccggcggtccacgacctgctcgcggtgatcgcccgcggcaccgacgcactg
ctcgccgcctccccggacaccaccgtgcagggcttccgcggcgccgtcccggcagaggtc
ggctcctatccggcccgtctggacgaggagggcgggccgcgtccggccgccgaacggatc
cacgtgctcacccagggccaccgcatgtccgcccccgtgctcgaggcctgggagcgggtg
gcccgacgcgtggccaccgcctccgcggacctggcgcgcgtgcgtgggctgacccgggcg
gccgaggaccgcacggacgacggtactgaggggccggacgttaccgaggggccggacagc
actgaggggccggacagcactgaggggccggacaacactgaggggccggacagcaccgag
gggccggacggcggacagatcccggccccggcggccgaggtccacgtggtgcccaccgcc
gcgcacgaggaccgcctcgtcctgcagcgcgtgctgcaggtccaccacggccagggcgtg
cccctggacgagatcgccgtgatcgcccgcgccggttcccgcgtcgccgagatcaccgcg
ttcctcgagtcggagggcgtgccggtcgtccgcgacgtcgccggcaccgtcctcaaggac
gagcccgcggtggccccgctgctgcacctgctgaccgtggtggccgccctcgtggacgag
gacggccgggacaccgccgaggaggaccgccaggacgtgctcgcggacgtcctcgactcc
ctcgacgtgcagcacctgctgcgcggccgctacggcagcaccacgccgctgcacctgcgc
cgcctgcgccaggacctgctcgccacggagcgcgcccgcggcggacgccgtcgctccgag
gtgctgcttccggccgccctgctggacccctcgctgctgggggaggaggcgcctcgccac
cacggcctgcagcgcctgtcccgcatgctccacgccgggctcgacgccgcccggcaggag
ggggccaccgcggagaccgtcctctgggccgtctgggaggccgccgaacgcggggaggca
tggcgccgtcttgcgctcggcaagaccgaccgcccggacgccgcccgcgagggccggcgc
gcggacgcggacctcgacgccgtcgtcgccctgttccagatggtcgagcgctatgtggac
cagttccccggcgctgcccccgcagcgttctcccgctacatggagtcccaggatctgccg
atggactccttggcccgcggcgcgtccggacgggacgccgtgcacgtgctcacccccgcc
tccgcggccggccgcggctggcacaccgtgctggtcgtcgggatccaggacggcgtctgg
cccaacacccgcctgcgcggccagctgctcggcgccacggacctggcggacctcgtcctg
caccgtcagggcgcggcctggccgaccccgcaccggatccgcctgcaggagacccgccag
gatgagctgcgcacgttcgccgccgcggtctcacgggcccgtcacacggtggtcggcacg
gccgtggtcaaccatgaggcggcaccgtccgagttcctcgagctgatcgcccgccccgaa
cgcaccgagaagggcgagctggtctgcaccgaggtccccgacccgctcaccaccggcgcc
ctcgtggcccggatgcggcgttcgctggaggagggcgagggcaaggacggcgccgaggcc
gcgggcggcctcgcctggctcgccgcccagggcgtggaggcagcccatccggaccactgg
tggggcctggccccgctgtcctcgcaggaaccggtcgtggacccggccggagaggtccgg
ctgtccccctcgcgcgcccagatgctcctgcagaacccgctcgactggatcatgtcccag
gccggggccgaagcgaccaccaccctggcgcagtccgtgggcaccttcgtgcacagcgtc
tgtgaggcccaccctgccggcccgcccgaagcgctgcgggacgaggtcgagcgtcgcctg
cccgagctcggcctgccggcgggctggaccggcgaggtccagctggagcgggtccgtgag
ctcgtggagaccttcatccgctacctgcccgagtcccgcgacgccggccgtgtgtgcgtg
gcccaggagatccggatcgacgtgccggtgccgctggccgacgtcaccgtgcgcatcacc
ggtgtgatcgaccgtctcgaggtggacgccgagggacgcccctacgtgatcgacctgaag
accggccggagcacccccacgcagaaggagatgctgcgccagccccagctggcggcctac
caggtggccctcgccgcgggcgcgctcaccgccgagggcgtcgaggtccccggcgtctcc
cgacccaccgagcccggcggcgccgggctcgtgcagctcggcgcggggaccaagaaggtc
aaggtccaggaccagcccgccctcggcgaggacgacgagtgggcatgggcccagctggcg
ctcgccgccggccggacggtcggcccgttctacctgaccctgcacggcacaggggaccgt
tgccgccacgcggcgctctgcccgctgtgctccgagggacggcaggtgaccgagtggacc
cggtga
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