Micrococcus lylae: CJ228_009445
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Entry
CJ228_009445 CDS
T09111
Symbol
gyrB
Name
(GenBank) DNA topoisomerase (ATP-hydrolyzing) subunit B
KO
K02470
DNA gyrase subunit B [EC:
5.6.2.2
]
Organism
mly
Micrococcus lylae
Brite
KEGG Orthology (KO) [BR:
mly00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mly03032
]
CJ228_009445 (gyrB)
03400 DNA repair and recombination proteins [BR:
mly03400
]
CJ228_009445 (gyrB)
Enzymes [BR:
mly01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
CJ228_009445 (gyrB)
DNA replication proteins [BR:
mly03032
]
Prokaryotic type
DNA Topoisomerases
CJ228_009445 (gyrB)
DNA repair and recombination proteins [BR:
mly03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
CJ228_009445 (gyrB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_gyraseB
DNA_gyraseB_C
Toprim
HATPase_c
HATPase_c_3
HATPase_c_2
Motif
Other DBs
NCBI-ProteinID:
WIK83400
LinkDB
All DBs
Position
2138957..2141068
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AA seq
703 aa
AA seq
DB search
MTPAEAVEAAAPPQTAPTETRDRKVPGDYGASAITVLEGLEAVRKRPGMYIGSTGPRGLH
HLVYEVVDNSVDEAMAGYASEITVTLQEDGGVRVEDDGRGIPVDMHPTEGRPTLEVVMTI
LHAGGKFGGGGYAVSGGLHGVGISVVNALSKRVDTEVRRQGHVWRMSFADGGVPQGDLVK
GEQTEATGTVQTFYADPEIFESVEFDYETLRARFQQMAFLNKGLKITLVDEREIEENQVL
EDEVVAEGTAEDASTDETGIDVDEQATPKRREVTYLYENGLLDYVEHLNSKKKVEYIHED
VIAFETEDTDRKIALEIAMQWTTAYSESVHTYANAINTHEGGTHEEGFRAALTSLINRYA
REKEILKPKEENLTGDDIREGLTAVVSVKLAEPQFEGQTKTKLGNSEARGFVHGVVTDHL
GDWLERNPGPAKDIIRKAIMASHARMAARKARDNARRKSPLESFGMPGKLADCSSKDPKR
CEVYIVEGDSAGGSAKRGRNPETQAILPLRGKILNVERARLDKALGNAEVQSMITAFGTN
IGEEFDISKLRYHKIVLMADADVDGQHITTLLLTVLFRYMRPLIEAGHVFLAQPPLYRIK
WSNAPHDYVFSDAERDAALEAGQAKGWRLPKDTGIQRYKGLGEMDYNELWDTTMDPEHRT
LLQVTMDDAAAADQVFSMLMGEDVESRRGFIQQNAKDVRFLDI
NT seq
2112 nt
NT seq
+upstream
nt +downstream
nt
gtgacccccgcggaggccgtcgaggcagccgcaccgccacagacggcaccgaccgagacc
agggaccgcaaggtccccggcgactacggcgcctccgccatcaccgtgctggagggcctc
gaggccgtccgcaagcgcccgggaatgtacatcggctccacgggcccccggggtctgcac
cacctcgtgtacgaggtcgtggacaactccgtggacgaggccatggccggctacgcctcc
gagatcaccgtgaccctccaggaggacggcggcgtccgcgtcgaggacgacggccgcggc
atcccggtggacatgcacccgaccgagggcaggcccaccctcgaggtggtcatgacgatc
ctccacgccggcggcaagttcggcggcggcggctacgccgtctccggcggcctccacggc
gtcggcatctccgtggtgaacgcgctctcgaagcgggtggacacggaggtccgccgtcag
ggccatgtctggcgcatgtccttcgccgacggcggcgtgccccagggcgacctggtcaag
ggcgagcagaccgaggccaccggcaccgtccagacgttctatgccgaccccgagatcttc
gagtcggtcgagttcgactacgagacgctgcgtgcccggttccagcagatggccttcctc
aacaagggcctgaagatcaccctggtggacgagcgcgagatcgaggagaaccaggtcctc
gaggacgaggtcgtggccgagggcaccgccgaggacgcgtccacggacgagaccggcatc
gacgtcgacgagcaggcgacccccaagcgccgcgaggtcacctacctctacgagaacggc
ctgctcgactacgtggagcacctgaactcgaagaagaaggtcgagtacatccacgaggac
gtcatcgccttcgagaccgaggacaccgaccgcaagatcgccctcgagatcgccatgcag
tggaccaccgcctactccgagtcggtccacacctacgccaacgcgatcaacacccacgag
ggcggcacccacgaggagggcttccgcgccgccctcacctccctgatcaaccgctacgcc
cgcgagaaggagatcctcaagcccaaggaggagaacctcaccggagacgacatccgcgag
ggcctgaccgcggtcgtctcggtgaagctcgccgagccgcagttcgagggacagaccaag
acgaagctcggcaactccgaggcacggggcttcgtgcacggggtggtcaccgaccacctc
ggcgactggctcgagcgcaacccgggtccggccaaggacatcatccgcaaggccatcatg
gcctcgcacgcccgcatggccgcccgcaaggcccgcgacaacgcccgccgcaagtctccg
ctggagtccttcggcatgcccggcaagctcgccgactgctcgtccaaggacccgaagcgc
tgcgaggtctacatcgtggagggcgactccgcgggcggctccgccaagcgcggccgcaac
ccggagacccaggccatcctcccgctgcgcggcaagatcctgaacgtggagcgcgcccgc
ctcgacaaggccctcggcaacgccgaggtccagtccatgatcacggcgttcggcacgaac
atcggcgaggagttcgacatctccaagctgcgctaccacaagatcgtgctcatggccgat
gcggacgtggacggccagcacatcaccaccctgctgctcaccgtgctgttccggtacatg
cgcccgctcatcgaggccggccacgtgttcctcgcgcagccgccgctgtaccgcatcaag
tggtccaacgccccgcacgactacgtgttctccgacgccgagcgcgacgccgccctcgag
gccggccaggccaagggctggcgccttcccaaggacaccggcatccagcgctacaagggc
ctgggcgagatggactacaacgagctgtgggacaccaccatggacccggagcaccgcacc
ctgctccaggtcaccatggacgacgccgccgccgcggaccaggtgttctccatgctcatg
ggcgaggacgtcgagtcccgccgcggcttcatccagcagaacgccaaggacgtgcgcttc
ctggacatctga
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