KEGG   Micrococcus lylae: CJ228_011030
Entry
CJ228_011030      CDS       T09111                                 
Name
(GenBank) DEAD/DEAH box helicase
  KO
K03724  ATP-dependent helicase Lhr and Lhr-like helicase [EC:5.6.2.6 5.6.2.4]
Organism
mly  Micrococcus lylae
Brite
KEGG Orthology (KO) [BR:mly00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:mly03400]
    CJ228_011030
Enzymes [BR:mly01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     CJ228_011030
    5.6.2.6  RNA 3'-5' helicase
     CJ228_011030
DNA repair and recombination proteins [BR:mly03400]
 Prokaryotic type
  Other factors with a suspected DNA repair function
   DNA helicases
    CJ228_011030
SSDB
Motif
Pfam: DEAD_assoc DEAD Helicase_C ResIII Lhr_WH
Other DBs
NCBI-ProteinID: WIK82102
LinkDB
Position
complement(2494004..2499427)
AA seq 1807 aa
MSEPQAEAVLGRFTAHTRTWFTGAFAAPTAAQLGAWDAVSSGRNALVIAPTGSGKTLSAF
LWALDGFLREPVAEGDAAPTKVLYISPLKALGVDVERNLRAPLIGITQTARNAGQEVPDI
RVGVRSGDTPAAERRRLVQDPPEILITTPESLYLMLTSRARSALAGVRTVIVDEVHAVAG
TKRGAHLALSLERLDAMLDKPVQRIGLSATVEPASEVARFLGGVQPVDVVRPVSEKRWDL
TVTVPVPDMTDLSLPPQPGTAQGGAAGAPDALGGQAGTAGAAASEPLGGSIWPHVEERIV
DLVSRRRSTLVFANSRRLAERLTGRLNEIWEARQEAARTQAEAGAVVGDEGDDDGPPPGS
ADRAPVRLGDVLTEATGLGPATTRPAPAQLMGGAGADSGTVSDFARAHHGSVSKEQRAIV
EEALKTGRIRCVVATSSLELGIDMGAVDQVIQVESPPSVASGLQRVGRAGHQVGEVSRGV
FFPKHRGDLVDTAVVTERMRAGRIEALRIPANPLDILAQHTVSAVAVQDLEAEEWFDLVR
RAAPFATLPHAAFASVLDLLAGKYPSDEFAELRPRILWDREAGTLTARPGAQRLAVTSGG
TIPDRGLFGVFLASDGGAESGAPGAADGDTGESASGRGDAGSARSGGRRVGELDEEMVYE
SRVGDVILLGATSWRIVDITADRVLVLPAYGEPGRLPFWRGDAAGRPAELGEAVGAFRRA
VDADPETAGTRLAEAGLDDWAQENLLTYLREQREATGQLPTEKTLVVERFTDELGDWRIV
LHSPFGMAVHAPWALAVGARLHQRFGIETSSGAAMAADDGIVLRLPLMDGDPPGAELFEF
TAEELEEIVTAEVGGSALFAARFRENAARALLLPRQNPGKRTPLWQQRQRSAQLLDVARK
HPDFPVILETVREVLQDVYDLPALKDVAGRIADRSVRMVEVTTPSPSPFAQSLLFGYVAQ
FIYEGDSPLAERRAAALSLDPALLNELLGTAQLRELLDADVIDAVEQDLQRLSPDRRVRG
LEGVADLLRLVGPLSPAEAAARLRPEEEEAVASEGEEAVSSEGEGAALAPEEGHDDGRPP
EPPASPEAGARSEDGRGAASPETALAHLDELTRTGRAFRFRHGGVERFAAVEDAARLRDA
LGVPLPMGVPVAFLDPVEDPLGDLVSRYARTHGPFTAEEAAFALGLGAAVVVPVLQRLAS
ERRVAQGAFRPEGTPGAAGPDAEWCDAEVLRRIRRRSLAALRAEVEPVDQAAYARFLADW
QHLRARPGRAGTATLEGVDGVAVVLDQLAGMPLPASAWESHVLPARVRDYTPSMLDELLS
TGEYVWSGVAPGTGNDGWVALHPADAADLTLRLPEPEDGAVGAGRPADGSDGGVRSTGET
PAAAPEHTALQAAVLEVLVGGGAWFFGPLVERVRAAHPAANGPDVLDALWQLVWSGKVGN
DTFAPVRGLLSAGKTAHRTGRQTPRARTARLGGGLGPTGTGGRGLSGRLAGVRGRGRYAG
LAGVRGQFEDLSPGLAGMSAAQTARAAGRWSLLVAPEPDPTLRAHATAELLLDRYGVITR
GSVVAEEVPGGFAGQYRLLTRMEEAGQVRRGHFVDRLGGAQFSTGAVVDRLRQFQKDGDG
PSPASDDVASGEVSQLGDAGADTWAGSWGAGEVSPLGPSRAAAGAGPSSGSGRRTQERGP
AAWALAATDPANPYGAALDWPAVPAGPDGVPPTGQRPGRKAGAIVVLVEGALALYVERGG
RTLLAFSDDRAALQAAAGALVHALRQAKTEKLALEKLNGGPLLGTPLAEAMLAAGFYSSP
SGLRYRG
NT seq 5424 nt   +upstreamnt  +downstreamnt
atgtctgagccccaggccgaggccgtcctcggccggttcaccgcccacacccgcacctgg
ttcaccggcgccttcgccgcccccaccgcagcgcagctcggcgcctgggacgcggtgtcc
tccggccgcaacgccctggtgatcgccccgaccggctccggcaagaccctctccgccttc
ctctgggccctggacggcttcctccgcgagcccgtggcggagggggacgcggcgcccacc
aaggtcctctacatctctccgctgaaggcgctcggcgtggacgtggagcggaatctgcgc
gccccgctgatcggcatcacgcagaccgcccgcaacgccggtcaggaggttccggacatc
cgggtgggcgtgcgctccggggacaccccggccgccgagcggcgacgcctggtgcaggac
ccgccggagatcctcatcaccaccccggagtcgttgtatctgatgctcacctcgcgtgcc
cgctcggcgctggcgggggtgcgcacggtgatcgtggacgaggtccacgcggtggccggc
accaagcgcggcgcccacctggccctgtccctcgagcgcctggacgcgatgctggacaag
cccgtccagcgcatcggcctgtccgccacggtggaaccggcctccgaggtcgcccggttc
ctcggcggcgtccagccggtggacgtggtgcgtccggtctccgagaagcgctgggacctc
accgtgaccgtgccggtgccggacatgacggacctgtccctgccgccgcagccgggcacc
gcccagggaggggcggcgggcgccccggatgcgctgggtgggcaggccggcaccgccgga
gcggctgcctccgagcctctcggcggctcgatctggccgcatgtggaggagcggatcgtg
gatctggtgtcccggcgacgctccaccctggtcttcgcgaactcccgccgcctggccgag
cgcctcaccggacggctcaacgagatctgggaggcacgccaggaggcggcgaggacccag
gcggaggcgggtgccgtcgtcggggatgagggggacgacgacggccccccgcccgggtcc
gccgaccgggcacccgtccgcctcggggacgtcctgaccgaggcgaccgggctgggcccg
gcgaccacgcggcccgcacccgcgcagctgatgggcggcgccggcgcggactccgggacg
gtctcggacttcgcccgtgcgcaccacggctcggtgtccaaggagcagcgggcgatcgtg
gaggaggcgctgaagaccggacggatccggtgcgtggtggccaccagctcgctggagctg
ggcatcgacatgggcgcggtggaccaggtgatccaggtggagtcgccgccgtccgtggcc
tctgggctgcagcgcgtgggccgtgccggacaccaggtgggcgaggtctcccgcggcgtg
ttcttccccaagcaccgcggggacctggtggacaccgcggtggtgacggagcggatgcgg
gccgggcggatcgaggcgctgcggatcccggcgaacccgctggacatcctggcccagcac
accgtgtccgccgtggcggtgcaggacctggaggccgaggagtggttcgacctggtgcgc
cgggccgcaccgttcgccacactgccgcacgcggcgttcgcctccgtgctggacctgctg
gccggcaagtacccctcggacgagttcgccgagctgcgcccgcgcatcctgtgggaccgg
gaggccggcacgctgaccgcccgcccgggggcgcagcggctggccgtgacctccggcggc
accatcccggaccgcggcctgttcggggtgttcctggcctcggacggcggggccgagtcc
ggggcccccggtgcggccgacggggacaccggcgagtccgcttccggccgcggtgacgcc
ggttccgcccgctccggcgggcgtcgcgtgggcgagctcgacgaggagatggtctacgag
tcccgtgtgggggacgtgatcctgctgggggcgaccagctggcggatcgtggacatcacc
gcggaccgggtgctcgtgctgccggcctacggcgagcccgggcggctgccgttctggcgc
ggcgacgccgccgggcgtccggccgagctcggcgaggcggtgggcgccttccgccgtgcc
gtggacgcggacccggagaccgccgggacgcgcctggccgaggccggtctggacgactgg
gcgcaggagaacctgctgacctacctgcgtgagcagcgcgaggccaccggacagctgccc
accgagaagacgctggtggtggagcggttcacggacgagctgggcgactggcggatcgtg
ctccactcccccttcggcatggccgtgcacgccccctgggcactggcggtgggcgcacgc
ctgcaccagcggttcgggatcgagacgagctccggcgccgccatggccgccgacgacggg
atcgtgctgcgcctgccgctcatggacggggacccgcccggcgcggagctgttcgagttc
accgccgaggagctggaggagatcgtcaccgcagaggttggcggctcggcgctgttcgcc
gcgcggttccgggagaacgccgcccgcgccctgctgctgccgcgtcagaaccccggcaaa
cggaccccgctgtggcagcagcggcagcggtcggcgcagctgctggacgtggcccgcaag
cacccggacttcccggtgatcctggagaccgttcgcgaggtgctgcaggacgtctacgac
ctgccggcgctgaaggacgtggccggtcggatcgccgaccgctcggtgcgcatggtggag
gtgaccacgccgagcccgtctccgttcgcgcagtccctgctgttcgggtacgtggcgcag
ttcatctacgagggcgactcgcccctggccgagcggcgggccgccgccctgtccctggac
ccggccctgctcaacgagctgctcggcaccgcccagctgcgcgagctgctggacgcggac
gtcatcgacgccgtggagcaggacctgcagcggctctccccggacaggcgcgtgcgcgga
ctcgagggcgtggcggacctgctgcggctggtcggcccgctgagcccggccgaggccgcg
gcgcggctgcggccggaggaagaggaggccgtcgcatcggagggtgaggaggccgtctca
tcggagggtgagggcgccgccttggcgccggaggagggccacgacgacgggcgcccaccc
gagccccccgcctcgccggaggcgggggccaggtcggaggacggccgtggagcggcctcc
ccggagaccgctctggcccacctggacgagctgacccgcaccgggcgcgcgttccggttc
cggcacggcggggtggagcgcttcgccgcggtggaggacgccgcccgcctgcgcgacgcc
ctgggcgtgcccctgccgatgggcgtgccggtggcgttcctggacccggtggaggacccg
ctcggggacctcgtctcccggtacgcccgcacgcacggcccgttcacggcggaggaggcg
gcgttcgccctcggcctcggggcggccgtggtggtgccggtgctgcagcggctggcctcc
gagcgccgtgtggcccagggcgccttccggccggagggcacccccggggccgccggcccg
gacgccgagtggtgcgacgccgaggtgctgcggcggatccgcaggcgttccctcgccgcg
ctgcgcgccgaggtcgagccggtggaccaggccgcatacgcccggttcctcgcggactgg
cagcacctgcgggccaggcccggccgggccggcaccgccaccctcgagggcgtggacggg
gtggccgtggtgctggaccagctggccggcatgcccctgccggcgagcgcctgggagtcc
cacgtgctgccggcccgcgtccgcgactacacgccgagcatgctggacgagctgctctcc
accggcgaatacgtgtggtccggggtggcccccggcaccggcaacgacggctgggtcgcc
ctgcaccccgccgacgccgcggacctgaccctgcgtctgcccgagccggaggacggggcc
gtgggcgcaggcaggcccgcggacggctccgacggcggtgtccggtccaccggagagacg
cctgcggcagcgcccgagcacaccgccctgcaggccgccgtcctcgaggtcctcgtcggc
gggggcgcctggttcttcggcccgctcgtcgagcgcgtgcgggccgcccacccggccgcg
aacggccccgacgtcctcgacgccctctggcagctcgtctggtccgggaaggtcggcaac
gacacctttgcgcccgtccgcggcctgctgtcggcgggcaagacggcgcaccgcaccggt
cggcagacgccccgggcccgcaccgcccgcctcggcgggggcctcggtcccaccggcacg
ggcggccgcgggctgtccggacgcctggctggggtgcgcggccggggccgctacgccggt
ctcgccggcgtccgcgggcagtttgaggacctctcccccgggctggcggggatgtccgcg
gcccagaccgcgcgggcggccggacggtggtccctgctcgtggccccggaacccgacccg
accctgcgcgcccacgccaccgccgagctgctgctggaccgctacggcgtgatcacccgc
ggctccgtggtggccgaggaggtccccggcggcttcgccggccagtaccggctgctcact
cgcatggaggaggccgggcaggtgcggcgtggccacttcgtggaccgcctcggcggcgcc
cagttctccaccggcgcggtggtggaccggctccgtcagttccagaaggacggcgacggc
ccctcccccgcgtcggacgacgtcgcctcaggcgaggtgtcgcagctcggtgacgccggt
gccgatacctgggcaggctcctggggtgcgggcgaggtgagcccgctgggaccgtcgcgg
gccgcggcgggtgcggggccgtcgtcgggaagcgggcgcaggacgcaggagcgtggcccg
gccgcgtgggcgctggcggcgaccgacccggccaacccctacggtgcggccctggactgg
ccggccgtgcccgccgggccggacggggtgccgcccaccggacagcggccgggacgcaag
gcgggggcgatcgtggtgctcgtcgagggcgcgctggcgctctacgtggagcgcggcgga
cggacgctgctggctttctcggatgatcgggcggcgttgcaggcggccgcgggggcgctc
gtgcacgcgctgcggcaggcaaagaccgagaagctggcgctggagaagctcaacggcggg
ccgctgctgggcaccccgctggccgaggcgatgctggccgccgggttctactcgagcccg
tcggggctgcgctaccgcggctga

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