Micrococcus lylae: CJ228_011805
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Entry
CJ228_011805 CDS
T09111
Symbol
pcrA
Name
(GenBank) DNA helicase PcrA
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
mly
Micrococcus lylae
Pathway
mly03420
Nucleotide excision repair
mly03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
mly00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
CJ228_011805 (pcrA)
03430 Mismatch repair
CJ228_011805 (pcrA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mly03400
]
CJ228_011805 (pcrA)
Enzymes [BR:
mly01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
CJ228_011805 (pcrA)
DNA repair and recombination proteins [BR:
mly03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
CJ228_011805 (pcrA)
MMR (mismatch excision repair)
Other MMR factors
CJ228_011805 (pcrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PcrA_UvrD_tudor
UvrD_C_2
AAA_30
Viral_helicase1
AAA_22
ResIII
Motif
Other DBs
NCBI-ProteinID:
WIK82240
LinkDB
All DBs
Position
2643930..2646617
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AA seq
895 aa
AA seq
DB search
MDDLFAALGRAARPDRRSGSSDPQTALPGLVPTSVTSRQADPEAGFDPEAGAGRRVGAPA
TGGPAGGAVAPPSPESLVEGLNPQQAAAVQHTGSPLLIVAGAGSGKTRVLTHRIAWLLAT
GHARPHEVLAITFTNKAAAEMRERITGLIGPMARRMWISTFHSSAVRILRNEASAIGLKS
TFTIYDSADSLRLVTQIAKAQDLDPKRFHPKGILNKISSLKNELTEADDYAATVAQNDPW
GQAVSAVYTDYTARLRQANALDFDDLIGMTVHMFEAFPAILDNYRRRFRHVLVDEYQDTN
HAQYRLIRLLAGPAGVPDGVQTPGGELTVVGDSDQSIYAFRGADIRNIVEFEEDFADAAT
IKLEQNYRSTQTILDAANAVISNNADRRPKSLWTAEGAGEKIVGYTAENESAEAEWIASQ
IDRLQDEHGVRPKDVAVFYRTNAQSRSLEERLVTRGIPYRVIGGTRFYDRKEIKDALAYL
RALVNPDDDINVRRILNEPKRGIGDRAEGAVAAWADRNRIPFFAALRDAENAPGMATRSL
KAVRAFVQMMDDLAQVAETSDPATVLEAVLEQSGMLAALRESEDLQDESRADNLGELVAV
VRSFSASNPEGTLSDFLEQVALVADADQLPAAPDVEGEALAEQQGQVTLMTLHTAKGLEF
PVVFLTGMEHGVFPHSRSMTDEKEMAEERRLAYVGLTRARERLHVTRAEVRSLWGQHQYN
PPSQFLAEIPEALIDWEREGAVRPGGAQFGSITSLAGAGTSRYAQRFGGSGATGSGRGSS
GRASSYGSGAYGSGTRRNDDGPAPRVRQRLTRGDEAKDLTVPTGVVRGQAPRRVSPQREV
VKLVPGDRVRHATFGEGSVVGVSGEGDKTVATVTFAETGAQKRLLLRYAPLEKVD
NT seq
2688 nt
NT seq
+upstream
nt +downstream
nt
atggatgacctcttcgccgccctcggccgtgccgcccgccctgaccgccgttccggatct
tcggatccgcagaccgccctgcccggactcgtgccgacgtccgtcacctcccggcaggcc
gatccggaggcgggcttcgacccggaggccggtgccgggcgccgcgtgggagcgcccgca
acaggcgggccggcaggcggagccgtggcgccgccgtcgccggagtcgctggtggagggg
ctgaaccctcagcaggccgccgcggtgcagcacaccggctcgccgctgctgatcgtggca
ggcgcgggctcgggcaagacgcgcgtgctgacgcatcgcatcgcctggctgctggccacc
ggccatgcccgcccgcacgaggtcctggccatcaccttcaccaacaaggccgccgcggag
atgcgcgagcgcatcaccgggctgatcggccccatggcgcggcgcatgtggatctccacg
ttccactcctcggccgtccgcatcctgcgcaacgaggcctcggcgatcgggctgaagtcc
acgttcaccatctacgactccgcggactcgctgcgcctggtcacccagatcgccaaggcg
caggacctggatccgaagcggttccaccccaagggcatcctgaacaagatcagctcgctg
aagaacgagctgaccgaggcggacgactacgcggccaccgtggcccagaacgacccgtgg
ggccaggccgtctccgcggtctacacggactacaccgcacgcctgcgccaggcgaacgcc
ctggacttcgacgacctcatcggcatgaccgtgcacatgttcgaggcgttcccggcgatc
ctggacaactaccgccgccggttccgccacgtgctcgtggacgagtaccaggacaccaac
cacgcccagtaccggctgatccgcctgctcgccggcccggcgggcgtcccggacggggtg
cagaccccgggcggcgagctgaccgtggtgggcgactcggaccagtcgatctacgccttc
cgcggcgcggacatccgcaacatcgtggagttcgaggaggacttcgccgacgcggccacc
atcaagctggagcagaactaccgctccacgcagaccatcctggacgccgccaacgcggtg
atctcgaacaacgcggaccgccgccccaagtccctgtggacggccgagggggcgggcgag
aagatcgtcggctacaccgcggagaacgagtccgcggaggccgagtggatcgcctcgcag
atcgaccggctccaggacgagcacggcgtccgccccaaggacgtcgccgtcttctaccgc
accaacgcccagtcccggtcgctcgaggagcgtctggtcacccgcggcatcccgtaccgc
gtcatcggcggcacgcggttctacgaccgcaaggagatcaaggacgccctggcctacctg
cgggcgctcgtgaacccggacgacgacatcaacgtccgccgcatcctcaacgagcccaag
cgcggcatcggagaccgtgcggagggcgccgtggccgcctgggcggaccgcaaccgcatc
ccgttcttcgccgccctgcgggacgcggagaacgcccccggcatggcgacccgctcgctc
aaggccgtcagggccttcgtgcagatgatggacgacctcgcccaggtcgccgagacctcg
gacccggccaccgtgctcgaggccgttctggagcagtccggcatgctcgccgcgctgcgc
gagtccgaggacctgcaggacgagtcccgcgcggacaacctcggcgagctcgtggccgtg
gtgcgctccttctccgcctcgaacccggagggcaccctctccgacttcctcgagcaggtc
gccctcgtggcggacgcggaccagctgccggccgcgccggacgtggagggtgaggcgctc
gccgagcagcagggccaggtcaccctgatgaccctgcacaccgccaagggcctcgagttc
ccggtggtgttcctgaccggcatggagcacggcgtcttcccccattcgcgctccatgacg
gatgagaaggagatggccgaggagcgccgcctggcctatgtgggcctgacccgcgcccgc
gagcgcctgcacgtgacccgtgccgaggtccgctcgctgtggggccagcaccagtacaac
cctccgagccagttcctcgccgagatccccgaggccctcatcgactgggagcgtgagggc
gccgtccgtcccggcggcgcgcagttcggctccatcacctcgctggcaggagccggcacc
tcccggtacgcccagcgcttcggcgggtccggggccaccggttccgggcgcggctcgtcc
ggccgcgcctcctcgtacggatccggcgcctacggctccggcacccggaggaacgacgac
ggccccgcgccgcgtgtgcggcagcgcctcacccgcggagacgaggcgaaggacctcacg
gtgccgacgggcgtcgtccgcggccaggcgccgaggcgcgtcagcccgcagcgcgaggtc
gtgaagctggttcccggggaccgggtgcggcacgcgacgttcggcgaggggtcggtcgtc
ggcgtctccggcgagggggacaagacggtggccaccgtgaccttcgcggagaccggcgcg
cagaagcgcctgctgctccggtacgcgccgctggagaaggtcgactga
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