Microbacterium lushaniae: F6J85_00850
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Entry
F6J85_00850 CDS
T07230
Symbol
recQ
Name
(GenBank) DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
mlz
Microbacterium lushaniae
Pathway
mlz03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mlz00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
F6J85_00850 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mlz03019
]
F6J85_00850 (recQ)
03400 DNA repair and recombination proteins [BR:
mlz03400
]
F6J85_00850 (recQ)
Enzymes [BR:
mlz01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
F6J85_00850 (recQ)
Messenger RNA biogenesis [BR:
mlz03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
F6J85_00850 (recQ)
DNA repair and recombination proteins [BR:
mlz03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
F6J85_00850 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
HRDC
DEAD
RecQ_Zn_bind
Helicase_C
SBP_bac_11
PSD2
Motif
Other DBs
NCBI-ProteinID:
QEW01785
UniProt:
A0A5J6KZZ6
LinkDB
All DBs
Position
183950..185959
Genome browser
AA seq
669 aa
AA seq
DB search
MSAPGYDPDPGYADLEDPYAGFDWDPDDAPPPDDLFSPPPPGDAAGFGPVAGAASVPGLD
AAVRDFTGRDPRDVLHEVYGYDTFRGDQGDVVSHVIGGGDAVVLMPTGGGKSVTYQVPAL
VRPGTGLVVSPLIALMHDQVDALVANGVRAAYLNSTQSPGERQAVEQAYLAGTLDLLYVA
PERLNGAQTLNLLARGRLSVIAIDEAHCVSQWGHDFRPDYLALGDLADRFPGVPRMALTA
TATPATAREIVERLRLDGARRFVASFDRPNIQYRIAPKVEPRKQLAAFIRAQPEGSAGIV
YALSRKTVDQTAEFLRGQGIDALAYHAGLDGSVRAAHQSRFLREDGVVMVATIAFGMGID
KPDVRFVAHIDLPKSVEGYYQETGRAGRDGEPAVAWMAYGLGDVVQQRRMIDQSPGDRTF
KMRLGQHLDAMLGLCETVACRRQNLLAYFGEHAGACGNCDTCLEPPETWDGQVAAQKLLS
TIVRLQRERGQSFGAGHLVDILRGAKTDRIATQGHDKLATYGIGADLSDQDWRSVVRQLL
ARGLLVAQGDYGTLGLTEASGGVLRGETPVPLRRDTLGRTGGGPRVRKSSAAESVDAGDR
DLFEALRAWRAEQAREQGVPAYIVFGDATLRALAEARPSSLGDLDGITGIGAKKREAYGD
RILAVVAAH
NT seq
2010 nt
NT seq
+upstream
nt +downstream
nt
gtgagtgcgcccggatacgaccccgacccgggatacgccgacctcgaagacccgtacgcc
gggttcgactgggaccccgacgacgctccgccgcccgacgacctcttctcgccgcccccg
ccgggggatgccgcgggcttcggaccggtcgccggcgccgcatccgtcccgggcctggac
gccgcggtgcgcgacttcaccgggcgcgatccgcgcgacgtgctgcacgaggtctacggc
tacgacacgttccgcggcgatcagggcgacgtcgtctcgcacgtcatcggcggcggcgac
gcggtcgtgctcatgcccaccggcggtggcaagagcgtcacctaccaggtgcccgcgctc
gtgcggccgggcaccgggctggtcgtgagcccgctcatcgccctcatgcacgatcaggtc
gacgcgctcgtggccaacggcgtgcgggcggcctacctcaactccacccagagccccggc
gaacggcaggccgtcgagcaggcgtacctcgccggcaccctcgacctcctctacgtcgcg
cccgagcggctgaacggcgcgcagaccctcaacctgctcgcgcgcggccggctcagcgtc
atcgcgatcgacgaggcgcactgcgtgtcgcaatggggacacgacttccgccccgactat
ctcgcgctcggcgacctcgccgaccggttccccggcgtcccgcgcatggcgctgaccgcg
acggcgacgcccgcgaccgcgcgcgagatcgtcgagcgcctgcgcctggacggcgcccgc
cggttcgtcgcgagcttcgaccgtcccaacatccagtaccgcatcgcgccgaaggtcgag
ccgcgcaagcagctggccgccttcatccgcgcgcagccggagggttcggccggcatcgtc
tacgccctcagccgcaagaccgtcgaccagaccgcggagttcctgcgcgggcaggggatc
gacgcgctggcctatcacgcgggtctggacggctccgtccgcgccgcccaccagtcgcgg
ttcctccgtgaggacggcgtcgtgatggtcgcgacgatcgccttcggcatgggcatcgac
aagcccgacgtccgcttcgtcgcccacatcgatctgcccaaatcggtcgagggctactac
caggagaccggtcgcgcgggccgcgacggcgagccggccgtcgcgtggatggcgtacgga
ctcggcgacgtcgtgcagcagcgtcgcatgatcgaccagtcgcccggtgaccgcaccttc
aagatgcgcctgggccagcacctggacgcgatgctggggctgtgcgagaccgtggcctgc
cgccggcagaacctgctcgcctacttcggggagcacgccggcgcgtgcggcaactgcgac
acgtgcctcgagccgcccgagacgtgggacggccaggtcgccgcgcagaagctcctctcc
acgatcgtgcgcctgcagcgcgagcgcgggcagtccttcggtgccgggcacctcgtcgac
atcctgcgcggcgcgaagaccgaccgcatcgccacgcaggggcacgacaagctcgccacc
tacggcatcggcgccgacctgtcggatcaggactggcgcagcgtcgtgcggcagctgctc
gcacggggactcctcgtcgcgcagggcgactacggcacgctgggcctcaccgaggccagc
ggaggagtgctgcgcggcgagacgcccgtgccgctgcgccgcgacacgctcggacgcacc
ggcggcgggccgcgcgtgcgcaagtcttccgcggccgagtcggtggatgccggcgaccgc
gacctgttcgaggcgctgcgggcctggcgggccgagcaggcgcgggagcagggcgttccg
gcctacatcgtcttcggcgacgcgacgctgcgcgcgctcgccgaagcccgcccctcctcc
ctcggcgatctggacggcatcaccggcatcggcgccaagaagcgcgaggcctacggcgac
cgcatcctcgccgtcgtcgccgcccactga
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