Microbacterium lushaniae: F6J85_03780
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Entry
F6J85_03780 CDS
T07230
Name
(GenBank) AAA family ATPase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
mlz
Microbacterium lushaniae
Pathway
mlz03420
Nucleotide excision repair
mlz03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
mlz00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
F6J85_03780
03430 Mismatch repair
F6J85_03780
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mlz03400
]
F6J85_03780
Enzymes [BR:
mlz01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
F6J85_03780
DNA repair and recombination proteins [BR:
mlz03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
F6J85_03780
MMR (mismatch excision repair)
Other MMR factors
F6J85_03780
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PcrA_UvrD_tudor
Viral_helicase1
AAA_30
PAC4
AAA_16
Motif
Other DBs
NCBI-ProteinID:
QEW02301
UniProt:
A0A5J6L1L7
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All DBs
Position
815285..817720
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AA seq
811 aa
AA seq
DB search
MTDASTPLIVGGDRGPQSGADAPRADDDLLAGLNPPQREAVTYRGPALLIVAGAGSGKTS
VLTRRIASLLRGGEAWPSQILAITFTNKAAGEMRERVRQLIGDRAEGMWISTFHSACVRI
LRREAQQFGFTKAFTIYDSGDSRALIKRLVKEHEGDAFGLTPAGTQSRISKLKNELADAE
SYARQANMSDPVERVFVEIFSAYQRALQRANAFDFDDLIGQTVYLFRAFPHVADVYRRRF
RHILVDEYQDTNHAQYALIHELTRPIGSDAGPIASSGGMMIFDADPADDPSKAPASLTVV
GDSDQSIYAFRGADIRNISEFERDYPGAKVVLLEQNYRSTQNILSAANAVISNNFDRKEK
RLWTDVGAGDPIIGFTGYSQHDEAQFVADEVEALRKGGVDYSQMAVFYRTNSQSRALEEI
FIRSAIPYKIMGGTKFYERAEIKDAMAYLVAVANPADEMAVRRILNRPRRGIGDVTETAI
ARYAADEQITFRDALANASALGVGPKLQQAIAHLDAVLAEAREIMLPASGELAPPTAVAD
GLTLLLNKSGYFDALRASRDPQDEARLENLDELIAVAREFARNNPEGTVVDFLTEVALVS
DADDLEDASGSVSLMTLHTAKGLEYDAVFVTGVEEDLLPHRISAGEPGGPQEERRLFYVG
ITRARKRLYLSLAMTRAQFGEVSVAMPSRFLQEIPADLVDWRQSPGDVNSRGGMQSRALN
ARPRRPGQGRYGDDLVPKSSAIDKFPNRIPAKVRDNGDMELAAGDRIRHDDFGEGHVDAI
TGEGAKRVAHVRFEKVGAKKLLVKIAPITKL
NT seq
2436 nt
NT seq
+upstream
nt +downstream
nt
atgaccgacgcatccacgcccctcatcgtcggcggcgatcgcggtccgcagtccggtgcg
gacgcaccgcgcgcggacgacgatctgctcgccgggctcaacccgccccagcgtgaggcc
gtgacctatcgcggcccggcgctgctcatcgtcgcgggcgccggctccggaaagaccagc
gtgctcacgcgccgcatcgcctcgcttctgcgcggcggtgaggcctggcccagccagatc
ctcgcgatcacgttcaccaacaaggccgccggcgagatgcgcgagcgcgtccggcagctg
atcggcgaccgggccgagggcatgtggatctccacgttccactccgcgtgcgtgcgcatc
ctgcgccgtgaggcgcagcagttcggcttcaccaaggcgttcacgatctacgactcgggc
gactcccgcgcgctcatcaagcgattggtcaaggagcacgagggggatgcgttcggcctc
acccccgccggcacgcagagccgcatctccaaactcaagaacgagctcgccgacgccgag
tcgtacgcgcggcaggcgaacatgagcgaccccgtcgagcgggtgttcgtggagatcttc
tccgcgtaccagcgggccctgcaacgggcgaacgcgttcgacttcgacgacctcatcggc
cagacggtgtacctgttccgggccttcccgcacgtcgccgacgtgtaccgtcgccggttc
cgccacatcctcgtcgacgaataccaggacaccaaccacgcccagtacgcgctgatccac
gagctgacccggccgatcggctccgacgccggccccatcgcctccagcggcgggatgatg
atcttcgacgccgacccggccgacgatccgtccaaggccccggcctcgctcacggtcgtc
ggcgactccgaccagtcgatctacgcgttccgcggcgccgacatccgcaacatcagcgag
ttcgagcgcgactatcccggcgcgaaggtcgtgctgctcgagcagaactaccgctcgacg
cagaacatcctctccgccgccaacgccgtcatcagcaacaacttcgaccgcaaggagaag
cggctgtggaccgacgtgggggcgggggacccgatcatcgggttcaccgggtactcgcag
cacgacgaggcgcagttcgtcgccgacgaggtcgaggcgctgcgcaagggcggcgtcgac
tacagccagatggcggtgttctaccggacgaactcgcagtcgcgtgcgctggaggagatc
ttcatccgctccgcgatcccgtacaagatcatgggcggcacgaagttctacgagcgggcc
gagatcaaagacgccatggcctacctcgtcgccgtggccaatcccgccgatgagatggcg
gtgcgccgcatcctgaaccgaccgcgccgcggaatcggcgacgtgaccgagacggccatc
gcgcggtacgccgccgacgagcagatcacgttccgcgacgcgctggccaacgcgtcggcg
ctgggcgtggggcccaagctccagcaggcgatcgcgcacctggacgccgtcctggccgaa
gcgcgggagatcatgctgccggcgtcgggagaactcgcgccgcccacagccgtggccgac
gggctcacgctgctgctgaacaagagcggctacttcgacgcgctgcgcgccagccgcgac
ccgcaggacgaggcgcgtctggagaacctcgacgagctcatcgcggtggcccgcgagttc
gcccgcaacaaccccgagggcaccgtcgtcgacttcctcaccgaggtcgccctcgtctcc
gacgccgacgacctcgaggatgcgtcgggctcggtgtcgctcatgacgctgcacacggcg
aagggcctggagtacgacgcggtgttcgtcaccggcgtcgaggaagacctcctcccgcac
cggatctcggcgggggagccgggtggtccgcaggaggagcgtcgcctcttctacgtcggc
atcacgcgcgcccgcaagcgcctgtacctctccctcgcgatgacgcgggcgcagttcggc
gaggtctcggtggcgatgcccagccgcttcctgcaggagatccccgccgatctggtggac
tggcggcagtcgccgggcgacgtgaattcccgcggcggcatgcagtcgcgggcgctcaac
gcgcggccccggcgccccggacagggccgctatggcgatgacctcgtgccgaagtcgtcg
gcgatcgacaagttccccaaccgcatcccggcgaaggtgcgcgacaacggcgacatggag
ctggccgcgggcgaccgcatccgccacgacgacttcggcgagggtcacgtcgacgccatc
accggcgagggggccaagcgcgtcgcgcacgtgcggttcgagaaggtgggcgccaagaag
ctgctcgtgaagatcgccccgatcacgaagctgtga
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