Microbacterium lushaniae: F6J85_05800
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Entry
F6J85_05800 CDS
T07230
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
mlz
Microbacterium lushaniae
Pathway
mlz03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mlz00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
F6J85_05800
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mlz03019
]
F6J85_05800
03016 Transfer RNA biogenesis [BR:
mlz03016
]
F6J85_05800
Enzymes [BR:
mlz01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
F6J85_05800
Messenger RNA biogenesis [BR:
mlz03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
F6J85_05800
Transfer RNA biogenesis [BR:
mlz03016
]
Prokaryotic type
tRNA degradation factors
F6J85_05800
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
S1
PNPase
KH_1
RNase_PH_C
KH-I_KHDC4-BBP
KH_KhpA-B
PCB_OB
KH_2
Motif
Other DBs
NCBI-ProteinID:
QEW02663
UniProt:
A0A5J6L271
LinkDB
All DBs
Position
1259453..1261738
Genome browser
AA seq
761 aa
AA seq
DB search
MEGPEITAAEAVLDNGRFGTRTVRFETGRLAQQAQGAVAAYLDEETMLLSATSAGKHPRE
GFDFFPLTVDVEERSYAAGKIPGSFFRREGRPSTEAILVCRLIDRPLRPSFVEGLRNEVQ
IVVTVLSIAPGEFYDALAINAASLSTQISGLPFSGPIAGVRLALMPGSGEQADQWIAFPT
AAQLEEAVFDLIVAGRVVTDADGKDDVAIMMVEAEATESSWNLIKAGATKPNEQVVAEGL
EAAKPFLKELVAAQNVVANTAAKPIKEFPVFLPYSKETYDFVAGLAYDKLVPIYQIADKV
QRQDADDTLKDAVKAELLAAVEAGDLPAVATLEFSAAYKAVTKLIVRSRILTEGVRMDGR
GLADIRPLDAEVQVIPRVHGSAIFQRGETQILGVTTLNMLKMEQQIDSLSPVTHKRYMHH
YNFPPYSTGETGRVGSPKRREIGHGFLAERALVPVLPSREEFPYAIRQVSEALSSNGSTS
MGSVCASTLSLLNAGVPLRAPVAGIAMGLVSDEVDGQTRYAALTDILGAEDALGDMDFKV
AGTSDFVTAIQLDTKLDGIPSSVLTAALQQAHEARITILNVLNSAIDAPDEMAPTAPRVI
SVQIPVDKIGELIGPKGKTINAIQDATGADISIEEDGTVYIGATDGPSAEAARAQVNAIA
NPTNPEIGEQFLGTVVKIATFGAFISLVPGKDGLLHVSEVRKLAGGKRVENVEDVLSVGQ
KILVRITKIDDRGKLSLEPVTEESAASDEPAESATEAPAQV
NT seq
2286 nt
NT seq
+upstream
nt +downstream
nt
ttggaaggtccagaaatcaccgcagccgaagccgttctcgacaacggccgattcggcacc
cgcaccgtccggttcgagaccggtcgtctcgcgcagcaggcgcagggcgccgtcgccgcc
tacctcgacgaggagacgatgctcctctcggccaccagcgccggcaagcacccgcgtgaa
ggcttcgacttcttcccgctgaccgtcgacgtcgaagagcgctcgtacgccgccggcaag
atccccggctcgttcttccgccgcgagggccgcccctccaccgaggcgatcctggtgtgc
cgtctgatcgaccgtccgctgcgtccgtccttcgtcgagggcctgcgcaacgaggtccag
atcgtcgtcacggtgctctccatcgcgcccggcgagttctacgacgccctggccatcaac
gccgcgtcgctgtccacccagatctcgggtctgccgttctccggcccgatcgccggtgtg
cgcctggcgctcatgcccggctccggcgagcaggccgaccagtggatcgcgttccccacc
gccgcgcagctggaggaggccgtcttcgacctcatcgtcgccggccgtgtcgtcaccgat
gccgacggcaaggacgatgtcgcgatcatgatggtcgaggccgaggccaccgagagcagc
tggaacctcatcaaggccggcgcgaccaagccgaacgagcaggtcgtggccgaaggcctg
gaggcggcgaagccgttcctcaaggagctcgtcgccgcgcagaacgtcgtggccaacacc
gcggccaagccgatcaaggagttcccggtcttcctgccctacagcaaggagacgtacgac
ttcgtggcgggcctcgcgtacgacaagctcgtgccgatctaccagatcgccgacaaggtc
cagcgacaggacgccgatgacacgttgaaggatgccgtcaaggcggagcttctcgcagcc
gtcgaggcgggcgacctgcccgccgtggcgacgctggagttctcggccgcctacaaggcg
gtcaccaagctcatcgtgcgcagccgcatcctcaccgagggcgtccgcatggacggccgc
ggcctcgccgacatccgtccgctggatgcggaggtgcaggtcatcccgcgcgttcacggc
tcggcgatcttccagcgcggcgagacccagatcctgggcgtcaccacgctgaacatgctc
aagatggagcagcagatcgactcgctgtcgcctgtgacgcacaagcgctacatgcaccac
tacaacttcccgccgtactcgaccggtgagaccggtcgagtgggcagccccaagcgtcgc
gagatcgggcacggcttcctcgccgagcgcgcgctcgtccccgtgctgcccagccgcgag
gagttcccctacgcgatccgtcaggtctccgaggccctcagctccaacggttccacctcg
atgggctcggtgtgcgcctcgactctctcgctgctgaacgcgggtgtgccgctgcgcgcg
cccgtcgccggcatcgcgatgggtctggtctcggacgaggtcgacggccagacgcgctac
gccgcgctgaccgacatcctcggcgccgaagacgccctgggtgacatggacttcaaggtg
gccggtacgagcgacttcgtcaccgccatccagctcgacaccaagctcgacggcatcccg
tcgtcggtgctgaccgccgcgctgcagcaggcccacgaggcgcggatcacgatcttgaac
gtgctcaactccgcgatcgacgcgccggatgagatggccccgaccgcgccccgcgtgatc
agcgtccagatccccgtcgacaagatcggtgaactgatcggccccaagggcaagacgatc
aacgcgatccaggacgccacgggtgccgacatctccatcgaggaggacggcacggtctac
atcggtgccaccgacggcccctcggccgaggccgcccgcgcacaggtgaacgcgatcgcg
aaccccaccaacccggagatcggcgagcagttcctcggaaccgtcgtgaagatcgcgacc
ttcggtgcgttcatctcgctggtgcccggcaaggacggcctgctgcacgtcagcgaggtg
cgcaagctcgccggcggaaagcgcgtggagaacgtcgaagacgtgctctcggtcggtcag
aagatcctcgtgcgcatcacgaagatcgacgatcgcggcaagctgtcgctcgagccggtg
accgaagagtccgccgcgtccgacgagccagccgagagcgcgaccgaggcgcccgcccag
gtctga
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