Microbacterium lushaniae: F6J85_12110
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Entry
F6J85_12110 CDS
T07230
Name
(GenBank) AAA family ATPase
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
mlz
Microbacterium lushaniae
Pathway
mlz03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
mlz00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
F6J85_12110
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mlz03400
]
F6J85_12110
Enzymes [BR:
mlz01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
F6J85_12110
DNA repair and recombination proteins [BR:
mlz03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
F6J85_12110
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_30
TrwC
AAA_19
AAA_22
Helicase_RecD
UvrD_C_2
AAA_11
AAA_16
PIF1
T2SSE
DUF982
nSTAND3
cobW
DO-GTPase2
ABC_tran
TsaE
DEAD
NTPase_1
AAA_18
ATPase_2
ATP_bind_1
Glyco_hydro_20
AAA_23
NPHP3_N
UvrD-helicase
Motif
Other DBs
NCBI-ProteinID:
QEW03760
UniProt:
A0A5J6L5P6
LinkDB
All DBs
Position
2533118..2535868
Genome browser
AA seq
916 aa
AA seq
DB search
MRGGLQRWKRGAGSGGIGRAIDYAVKGSCDAHLHLSTGSDALEVYSNAVDASVTRFVVTD
GAITADELSADALRVWLTGHDPVTGEERGTQRLSPDADLLLDATLNHPKSYSIAALLHPE
LATEFEALQDRLRDRILTTWISELNARRGHGGLIREEITRIEVVELDHRRSRALDPHAHR
HLWLNVKVLGADGKWSNVDSRVAMKLHTLINAEGDLAARTDPQWVTALARHGFTLDDVGE
IAELVAAVRPFSRRSAQIEANRAKLIAQWSAEHGGASPSIQVLTQIDRRAWAMSRPNKPA
NLNEQSWETTVRDEIAGLLPRPVFDHSPVPLVSNPIDALDLDLLADAAVVDADERSTRSG
GRFSSFDLRAGATRALAGSGVIARRDELTETIDAITDYAHRKCVRLVKDAEIPGHVKALM
ATETLRLKTRLAGYLDALASPGRSLLPHELRQCAASPEDVERLDTSQFAAAGAIAGTAGL
VAITGPAGAGKTTMLRIAYEGLRAQQRRMLVVAPTRKAASVASREVGAEASSLHALLADH
GYRCNTDAAGAQVWTRLSIGEADPDTGLVYKGASRFVLRRGDRIVVDEAGMVDLQTAAAL
VDLALRQQVGVAMVGDPYQALPVGHAGAMASAARFATASVELDTVHRFSDPEYAALTLRL
RDPRDRDEALVVAAELFERGHVHRARSAEEARGAMVAAYFEWHARGKRVALVSGTNSEAD
AINHAIQQRRIDDGELDTTVLALGMGEQRILVGDTVQTRRNDPRTGVENRAQWVVRGIRD
DVITLASASDSGDIRGVSRDYALDHLQLAYASTVHGIQGETTDAAVVGPDVDAAGLYVGL
TRGRHHNIAITVARTDEEAIAQVGATMMRGTTELTIQDAMRAAHAELRRAARERGRRASA
PWTTPSWSPSHSGLSL
NT seq
2751 nt
NT seq
+upstream
nt +downstream
nt
atgcgtgggggcctacagcgatggaagagaggcgccggatccggtgggatcggccgcgcc
atcgactacgccgtcaagggaagctgcgatgcgcatctccacctctcgacgggatccgac
gcactcgaggtgtacagcaacgccgtcgacgcgagcgtcacccgattcgtggtgacggat
ggcgccatcacagccgatgagctgtcggcggatgctctccgggtgtggctgaccggccat
gacccggtcacaggagaggagcgcggaacccaacgactcagcccagacgccgacctcttg
ctcgatgcgacactcaaccaccccaagtcgtacagtatcgccgcgctgctgcacccggaa
ctggcgaccgagttcgaggcgctccaggaccgcctgcgcgaccggattctgaccacctgg
ataagcgagctcaatgcacgtcgcggccatggaggcctcatccgggaagagatcacccgc
atcgaggtcgtcgagctcgaccaccgtcgctcgcgcgcgctcgacccgcacgcgcaccgc
cacctctggctgaacgtgaaagtactcggcgccgacggcaagtggtccaacgtcgactcc
agggtcgcgatgaagctgcacacgctgatcaacgccgaaggcgatcttgccgcgcgcacc
gacccgcagtgggtcacagctcttgcccgccatggattcacgctcgatgacgtcggcgag
attgcggaactggtggcggcggtccggcccttctcccgtcggtcggcgcaaatcgaggcg
aatcgcgccaagctcatcgcgcagtggagcgccgagcacggcggcgcgagccccagcatc
caagtcctcacgcagatcgaccgtcgcgcgtgggcgatgtcgcgacccaacaagcccgcc
aacctcaacgagcagtcgtgggaaaccactgtccgcgacgagattgcggggctcctcccc
cggcccgtcttcgaccattcaccagtaccgctggtctcgaatccaatcgacgcgctggac
ctggaccttcttgcggacgccgcggtcgttgacgcggatgagcggtccacccgctccggc
ggtcggttcagttcgttcgacctccgcgccggcgccacgcgagctctcgcaggcagtggg
gtgatcgcgcgccgtgatgagctgaccgagacgatcgacgcgatcaccgactacgcgcat
cgcaagtgcgtgcgactggtgaaggatgccgagatcccgggccacgtgaaggcgctaatg
gcgaccgagaccctgcgcctgaagacgcgcctcgctggctacctcgacgcactcgcctcc
cccggccgctcactcttgccgcacgagttgcgtcagtgcgcggcctccccggaagacgtc
gagcggctcgacacctcgcaatttgccgcggcgggcgcgatcgcggggacagccggactt
gtcgcgatcaccgggccggccggcgcgggtaagaccacgatgctgcgcattgcgtacgag
gggctgagagcacagcaacgacggatgctggtggtcgcgccgacccgcaaggcggcgtcg
gtcgcgtcacgcgaggtgggtgccgaggcgtcgagcctgcacgcgctgctcgccgaccac
ggctaccgctgtaacaccgacgccgccggagcccaggtatggacgcggctgtcgatcggc
gaagcggacccggataccgggctcgtctacaagggggcgtcgcggttcgtgctccgacgc
ggcgatcggatcgtcgtggacgaggccggcatggtcgacctgcagaccgcggccgcgctc
gtcgatctcgcgctccgacagcaggtgggtgtggcgatggtgggtgatccgtatcaggcg
cttccggtcgggcacgccggagcaatggcatccgcagcgcgcttcgcgacagcatccgtc
gaactcgacaccgtgcaccggttcagcgaccccgagtacgccgctctcacgctgcggctg
cgtgacccgcgcgaccgggatgaagcgctcgttgttgccgcggagttgttcgagcgcggg
cacgtgcatcgggcgcggagcgcggaggaagcgcgcggcgcgatggtcgcggcctacttc
gagtggcacgcgcgcgggaagcgggtcgcgctggtgtcgggcacgaacagcgaggccgat
gcgatcaaccatgcgattcagcagcgccgcatcgacgacggcgaactcgataccaccgtg
cttgcgctagggatgggcgagcagcgcatcctcgtcggcgacaccgtgcagacgcgtcgc
aacgacccccgcaccggagtcgagaaccgtgcgcagtgggtggtgcgcggcattcgggat
gacgtcatcacgctcgcgtcggcgagcgacagcggcgacatccgtggcgtgagtcgtgac
tacgcgctcgaccacctgcaactggcgtacgcgtccacggtgcacggcattcagggcgag
acgacggatgctgccgtggtgggaccggatgtcgacgcagccgggctgtatgtcgggctg
acgcgaggccgccaccacaacatcgcgatcactgtcgcacggaccgacgaggaggcgatc
gcgcaggtgggcgccacgatgatgcgcgggacgaccgagctcacgatccaggacgcgatg
cgcgctgcgcacgccgagctgcggcgggctgcgcgggagcgggggcgccgggcttccgcg
ccctggaccacgccgagctggtctccttcgcatagcgggctctcgctgtga
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