KEGG   Methanosarcina mazei Go1: MM_0253
Entry
MM_0253           CDS       T00082                                 
Name
(GenBank) replication factor C subunit
  KO
K04800  replication factor C large subunit
Organism
mma  Methanosarcina mazei Go1
Pathway
mma03030  DNA replication
Brite
KEGG Orthology (KO) [BR:mma00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    MM_0253
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:mma03032]
    MM_0253
DNA replication proteins [BR:mma03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (archaeal)
    RFC (replication factor C)
     MM_0253
SSDB
Motif
Pfam: AAA RCF1-5-like_lid AAA_lid_RFC1 RuvB_N Rad17 AAA_22 AAA_assoc_2 AAA_14 AAA_16 nSTAND3 IPT AAA_6 Gp44_lid DUF815 AAA_24 AAA_30 DNAX_ATPase_lid NACHT TsaE IstB_IS21 AAA_28 RNA_helicase AAA_33 AAA_7 AAA_25
Other DBs
NCBI-ProteinID: AAM29949
UniProt: Q8Q084
LinkDB
Position
complement(337562..339394)
AA seq 610 aa
MVWFKMMSAIEWAEKYRPRTLGDVVGNRKAVQDLRKWAEEWQSGIPEKRAVILYGPAGIG
KTSSAHALAGDMEWEVIELNASDQRTAGVIEKIAGSAASMNTFFGGKRLIILDEADNLHG
TADRGGMRAISGIIKSTLQPIILIANDIYGLTPTVRNICLEIKFGSVQSRSMVPALKKVC
ESEGVSCSQEAVLQIAENAGGDFRSAINDLQAAANGKKALEAEDISTAGRDVKENIFKAM
QKIFKSTDCKRALESAYGLDESPEDLVHWIDENLPIQYARKDGDLEDIKTGFGYLSKADI
YLGRVKKRQNYRMWRYASMLMVCGAALSKTRPYPGFIKYQQPSLWRRLGQTRSRRDMRDN
IASKIGEHSFESMHYSRNNLLGFYSILLKDEASAVELTANLGLELEELMYLSGSAKVSKK
LQKIYDEAQNLLETKRDRTEEQEFFKAPAPAADDKQATLHCPVNIPEKEGNASAEKPESP
GPQSPERKQKTLDLGFDTPQKLPEKKRSSEMKLPENPEPAENNLFSLSEPLPEKGPIPDF
AGKKSLPELEEEKPSLSPLKKMSPANKEASKQGVKQGASEKGSPAADTQGGMEDGSKKAE
PKNQKTLFDF
NT seq 1833 nt   +upstreamnt  +downstreamnt
ttggtatggtttaagatgatgtcggcaattgaatgggctgaaaaataccgaccccggacc
cttggagatgtcgtggggaacaggaaggcagtgcaggatttgagaaagtgggctgaggaa
tggcagtccgggattcctgagaaaagggcagtgattctttacgggcctgcagggataggg
aagacttcaagcgctcacgcactggcaggggatatggaatgggaggttatagagctcaat
gcaagcgaccagaggactgcaggtgttattgagaagatagccggctcagcagcgtcaatg
aatactttttttgggggtaagcggctcattatacttgatgaagctgacaatctccacggg
actgcagacaggggcgggatgagggccatttccgggatcataaaatccacgctccagccg
ataatacttattgcaaatgatatttacgggttaactcccacagtccggaacatttgtctg
gaaattaagtttgggtccgtgcagagccggtccatggttcccgctttgaagaaggtctgt
gaatctgagggagtctcctgcagccaggaagctgtcctgcaaattgcagaaaatgcgggc
ggagacttcaggagcgctatcaatgatcttcaggctgcagctaacgggaagaaggctctc
gaagctgaagatatcagcactgcaggcagagatgttaaagagaatatctttaaggcgatg
cagaagatctttaaaagcactgactgcaaaagggctcttgaatccgcatacgggcttgat
gagagtcctgaggatcttgtgcactggatagacgagaacctgccaatccagtacgcgcgg
aaggatggcgacctcgaagatataaaaacgggttttggctacctttcaaaggctgacatt
tatctcgggcgcgtgaagaaacgccagaactacaggatgtggaggtatgccagcatgctc
atggtctgcggggctgccctttcaaagacaagaccgtatcctggctttattaagtaccag
cagccttcactctggagaaggctcgggcagacccgttccaggcgtgatatgcgggataat
attgcttcaaagatcggggagcacagctttgagtcgatgcattattccaggaacaacctt
ttaggtttttattcaatattgttaaaggatgaggcgtctgctgttgaacttactgcaaac
ctcgggcttgagcttgaagaactgatgtacctttcaggaagcgcaaaggtcagcaaaaaa
cttcagaaaatttacgatgaagcccagaaccttctggaaacgaaaagggatagaactgaa
gaacaggaattttttaaggctcctgctcctgcggcagatgataaacaggcaactctccac
tgtccggttaatattcctgaaaaagaagggaacgcttcagccgaaaaacccgaatctccc
ggtccccagtctccggaaagaaagcagaaaacccttgaccttggatttgacacacctcaa
aagcttcctgagaaaaaaaggtcttcagaaatgaaattgcctgaaaatcctgagcctgca
gaaaataatctgttctctctttctgagcctctgcccgaaaagggtccaattcctgacttc
gcagggaaaaagtcccttcctgaactcgaagaagagaagccgtctctttcaccgttaaaa
aagatgagtccggccaataaagaagcttcaaaacagggagtgaaacagggagcatctgaa
aaaggttcgcctgctgcagatacgcagggaggcatggaagatggttcgaaaaaagccgaa
cctaaaaatcagaaaacactttttgacttttaa

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