Methanosarcina mazei Go1: MM_0512
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Entry
MM_0512 CDS
T00082
Name
(GenBank) tRNA-intron endonuclease
KO
K01170
tRNA-intron endonuclease, archaea type [EC:
4.6.1.16
]
Organism
mma
Methanosarcina mazei Go1
Brite
KEGG Orthology (KO) [BR:
mma00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
mma03016
]
MM_0512
Enzymes [BR:
mma01000
]
4. Lyases
4.6 Phosphorus-oxygen lyases
4.6.1 Phosphorus-oxygen lyases (only sub-subclass identified to date)
4.6.1.16 tRNA-intron lyase
MM_0512
Transfer RNA biogenesis [BR:
mma03016
]
Prokaryotic type
tRNA spricing factors
tRNA splicing endonucleases
MM_0512
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Gene cluster
GFIT
Motif
Pfam:
tRNA_int_endo
tRNA_int_endo_N
Sen15
Motif
Other DBs
NCBI-ProteinID:
AAM30208
UniProt:
Q8PZI1
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All DBs
Position
complement(636450..637511)
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AA seq
353 aa
AA seq
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MNLLKTQLKGDRVLAGKEAVAELYKTGYFGRPKDDGLELSLVEAAYLQSRGKLDIELEGK
LLGFRAFFEQASLRQQNFELKYIVYKDLKERGYYVQPSAADFRVYPRGSHPGKSAAKIFV
HVLSERQPLSVKLLQESVASAENVHKQFILAVVDEESDLTFYEIKSASPKGEMPEPFPAV
KADATFLEDRVIAWDAEASGALYSRGFYGKMLDPERLQLSLVESLYLFSRGVIVVRDRKG
KIFSFDEFVEKASEIEGSFLRKYSAYKALRDSGHVVKTGFKFGTHFRVYRKVESIEKIPH
SEYLVNVIPEDYEFRLPVMSGAVRLANSVRKRMLFAVEKGEEVEYLDIGRVKM
NT seq
1062 nt
NT seq
+upstream
nt +downstream
nt
gtgaatctattgaaaacacaacttaaaggggacagggtcctcgcaggaaaggaagctgta
gccgaactttacaaaacaggttatttcgggcgtccaaaagacgacgggcttgaactttca
cttgtggaggctgcgtaccttcagtcccgaggaaaactcgacatcgagcttgaaggaaaa
ctgctaggtttcagggcattttttgaacaggcttctctgaggcagcagaatttcgagctt
aagtacatcgtttacaaggacctcaaagaaagaggatattatgtccagccctcagccgcg
gatttcagggtgtaccctcgaggcagccacccgggaaaaagcgcagcaaaaatttttgtt
cacgtcctttccgaaaggcagccactttctgtaaaacttttgcaggaatccgtcgcttct
gcagaaaatgtccacaagcagttcatcctggctgttgtggacgaagaaagtgacctcacc
ttttacgaaatcaaatccgcttctcccaaaggggaaatgcctgagcccttccctgcagtc
aaagccgatgcaactttccttgaagacagggtaatagcctgggatgcagaagcctccggg
gcactttattccaggggcttttacgggaaaatgcttgatcctgaaaggctgcagctttcg
ctggttgagtccctctaccttttttcgagaggggttatagtcgtcagggacaggaaagga
aaaatcttctcattcgatgagtttgttgaaaaagcttcggaaatcgaaggctctttcctg
cgcaaatacagcgcatataaagccctcagggactcagggcatgtggtcaagacaggattt
aagttcgggacacatttcagagtctacaggaaagtcgaatcaatagaaaaaattccccac
tcagaataccttgtgaacgttatccctgaagattacgagttcaggcttccggtcatgtcc
ggggctgtaaggctcgcaaacagcgtaagaaaaagaatgctctttgcggtcgagaaaggg
gaagaagtcgagtaccttgatataggcagggtcaaaatgtaa
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