Methanosarcina mazei Go1: MM_0852
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Entry
MM_0852 CDS
T00082
Name
(GenBank) Deoxyribodipyrimidine photolyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
mma
Methanosarcina mazei Go1
Brite
KEGG Orthology (KO) [BR:
mma00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mma03400
]
MM_0852
Enzymes [BR:
mma01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
MM_0852
DNA repair and recombination proteins [BR:
mma03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
MM_0852
Prokaryotic type
MM_0852
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GFIT
Motif
Pfam:
DNA_photolyase
FAD_binding_7
Motif
Other DBs
NCBI-ProteinID:
AAM30548
UniProt:
Q8PYK9
Structure
PDB
PDBj
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Position
complement(1005507..1006901)
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AA seq
464 aa
AA seq
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MIMNPKRIRALKSGKQGDGPVVYWMSRDQRAEDNWALLFSRAIAKEANVPVVVVFCLTDE
FLEAGIRQYEFMLKGLQELEVSLSRKKIPSFFLRGDPGEKISRFVKDYNAGTLVTDFSPL
RIKNQWIEKVISGISIPFFEVDAHNVVPCWEASQKHEYAAHTFRPKLYALLPEFLEEFPE
LEPNSVTPELSAGAGMVETLSDVLETGVKALLPERALLKNKDPLFEPWHFEPGEKAAKKV
MESFIADRLDSYGALRNDPTKNMLSNLSPYLHFGQISSQRVVLEVEKAESNPGSKKAFLD
EILIWKEISDNFCYYNPGYDGFESFPSWAKESLNAHRNDVRSHIYTLEEFEAGKTHDPLW
NASQMELLSTGKMHGYMRMYWAKKILEWSESPEKALEIAICLNDRYELDGRDPNGYAGIA
WSIGGVHDRAWGEREVTGKIRYMSYEGCKRKFDVKLYIEKYSAL
NT seq
1395 nt
NT seq
+upstream
nt +downstream
nt
ttgattatgaatccgaaacgtatcagggctcttaaatcagggaaacagggggacggacct
gttgtttactggatgagtcgggaccagagggctgaagataattgggctcttctcttttca
cgggcaatagcaaaagaagctaatgtgcctgtagtagtggttttttgcctgacggatgag
tttttagaggctggtatcaggcagtatgaattcatgctcaaagggcttcaggaacttgag
gtttcactttcccgtaaaaagattccgtctttcttcctgagaggggatcccggagaaaaa
atttcccggtttgtaaaagactataatgccgggactcttgttacggacttcagcccgctc
cgcataaaaaaccagtggatagaaaaagttatttccggcatttcaatcccgttttttgag
gttgacgcccataatgttgttccctgctgggaggcttctcaaaaacatgagtatgcagcg
catactttccgcccgaaactctatgctcttcttccagagtttcttgaagaattccctgaa
cttgagcctaattctgtaactcccgagctttcagccggtgccggcatggtggagacttta
tcggacgtactggaaaccggagttaaagcccttcttcctgagagagccttacttaaaaat
aaggatcctctttttgaaccttggcacttcgagcccggagaaaaagctgcaaaaaaggta
atggagagttttattgcagacaggcttgattcgtacggggcgctgagaaatgacccgaca
aaaaatatgctttcaaatctctcgccctatcttcatttcgggcagatatcttcccagagg
gttgtgcttgaagtggaaaaggcagaaagtaaccccgggtcaaagaaagcttttctggat
gagattcttatatggaaggagatttcggacaatttctgttattataacccaggatacgat
gggtttgaaagctttccatcctgggcaaaggaatctttaaacgcccacaggaatgatgtg
aggagtcatatctacacccttgaagagttcgaagcaggaaaaacacatgacccactctgg
aacgcgagtcagatggaacttctcagtacagggaaaatgcacggttacatgcgcatgtac
tgggcaaaaaaaattctggaatggagcgaatctcccgaaaaagcccttgaaattgcaatc
tgcctgaacgacaggtatgaacttgacggaagagaccccaatggatatgccggaattgcc
tggagtatcggaggagtccatgacagggcatggggggagagagaagttacaggaaaaatc
agatatatgagttatgaaggctgcaaaagaaaatttgacgttaaattatatattgaaaaa
tattcagctttgtag
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