Methanosarcina mazei Go1: MM_1027
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Entry
MM_1027 CDS
T00082
Name
(GenBank) Transcription initiation factor TFIIB
KO
K03120
transcription initiation factor TFIID TATA-box-binding protein
Organism
mma
Methanosarcina mazei Go1
Pathway
mma03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
mma00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
MM_1027
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
mma03000
]
MM_1027
03021 Transcription machinery [BR:
mma03021
]
MM_1027
Transcription factors [BR:
mma03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
TATA-binding proteins
MM_1027
Transcription machinery [BR:
mma03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
MM_1027
RNA polymerase III system
TFIIIB
MM_1027
RNA polymerase I system
SL1/TIF-1B
MM_1027
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TBP
DUF3378
RTT107_BRCT_5
Motif
Other DBs
NCBI-ProteinID:
AAM30723
UniProt:
Q8PY37
LinkDB
All DBs
Position
complement(1199798..1200349)
Genome browser
AA seq
183 aa
AA seq
DB search
MSESSIKIENVVASTKLAEEFDLTVIESEFEGAEYNKQKFPGLVYRVSDPKAAFLVFTSG
KVVCTGTKNVADVHTVVGNLAKKLNSIGIKTIENPQITVQNIVASADLHTILNLNAIAIG
LGLENIEYEPEQFPGLVYRIDEPKVVVLIFSSGKLVVAGGKSPEDCERSVEVVRQQLDSM
GLL
NT seq
552 nt
NT seq
+upstream
nt +downstream
nt
atgagcgaatctagtatcaagatcgaaaatgtggttgcatccaccaaactcgctgaagaa
ttcgacttaactgttatcgaatcagagttcgaaggagcagagtacaacaagcagaagttc
cccgggctcgtttacagggtttcagatcctaaagctgcattcctggtctttacttctggc
aaggttgtctgtacagggacgaaaaatgttgccgatgtacacacagttgtaggtaatttg
gcgaaaaagctgaacagtatagggattaagaccatagagaaccctcagattactgtccag
aacattgttgcttccgcagacctgcatactattttgaaccttaatgcaattgcaataggg
cttggacttgaaaacattgaatacgagcctgagcagtttcctggtcttgtatacagaatt
gatgagcccaaagtagttgtgcttatcttcagctccggaaaactggtagttgcaggcggt
aagagccctgaagattgcgagaggagcgtggaagtagtccgccagcagctcgacagtatg
ggtcttttataa
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