Methanosarcina mazei Go1: MM_1299
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Entry
MM_1299 CDS
T00082
Name
(GenBank) Replication factor-A protein
KO
K07466
replication factor A1
Organism
mma
Methanosarcina mazei Go1
Pathway
mma03030
DNA replication
mma03420
Nucleotide excision repair
mma03430
Mismatch repair
mma03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
mma00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
MM_1299
03420 Nucleotide excision repair
MM_1299
03430 Mismatch repair
MM_1299
03440 Homologous recombination
MM_1299
03460 Fanconi anemia pathway
MM_1299
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
mma03000
]
MM_1299
03032 DNA replication proteins [BR:
mma03032
]
MM_1299
03400 DNA repair and recombination proteins [BR:
mma03400
]
MM_1299
Transcription factors [BR:
mma03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
MM_1299
DNA replication proteins [BR:
mma03032
]
Eukaryotic type
DNA Replication Elongation Factors
RPA (replication protein A)
MM_1299
DNA repair and recombination proteins [BR:
mma03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
RPA (replication factor A)
MM_1299
MMR (mismatch excision repair)
MM_1299
DSBR (double strand breaks repair)
HR (homologous recombination)
MM_1299
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_anti-codon
CDC24_OB3
Ssb-like_OB
REPA_OB_2
TriTu
OB_MEIOB_N
RecG_wedge
POT1PC
Motif
Other DBs
NCBI-ProteinID:
AAM30995
UniProt:
Q8PXC2
LinkDB
All DBs
Position
1544636..1546090
Genome browser
AA seq
484 aa
AA seq
DB search
MTDIETIYKKLSHVISKEDFLQRIQEKVENMGGLCDETMAAMLVANELGFSDAGRDSIKI
ENITPESGPVNFIARIISVFDTKEFTRNDGTIGRVGNLIVGDETGKVKLTLWDNMADLIK
MGKIKAGQSVQVSGFAKQGYSGVEVNIGNNGVLTESEEEIDVVSNSYKIKDIKDGMGDIN
LNGKVLEVSEIRTFQRKDGNSGRVGNLMLGDETGTLRVTLWDDKTDFLSQVEYGDSIELI
NAYARENAFSQKVELQVGNRSIIRKSEKKIEYEEEFTPIDDIKADMNNINISGRILDISE
VRTFEKKDGSTGRVGNVLLGDSTGKIRLTLWDEKTDILEEIDFDETVEVLNAYSRENTFS
QQVELNLGARGIIQRSEKKVEYREKFTDIADIIPGESYSIQGKVAEIGELREFEKEDGTE
NVVANLQLKDDTGSIRLTLWGEQAYVIEDLDIDSEIQIIDAYARYGLNEEIELSVGNRSR
VIIL
NT seq
1455 nt
NT seq
+upstream
nt +downstream
nt
atgaccgatattgaaactatttataagaagctcagccacgtcataagtaaagaggatttc
ctgcagcgcatacaggaaaaagtagagaatatgggagggctctgtgatgagacaatggct
gccatgctggtagccaatgagctgggattctcggatgcaggcagagatagcataaagata
gaaaacattacccccgaaagcggacctgttaactttattgcaagaattatttctgttttc
gataccaaagaattcacaaggaatgacgggactataggaagggtaggaaaccttattgtt
ggggatgagaccggaaaagtaaagttaaccctgtgggacaatatggcagaccttattaaa
atgggaaaaataaaggcagggcaatccgttcaggtcagtggattcgcaaagcagggatat
tccggagtggaagttaatattggtaacaatggagtcctgacagaaagtgaggaagagatc
gatgttgtttcaaatagttataaaataaaggatataaaggatggcatgggagacatcaac
cttaacggaaaggtactggaagtctccgagatcaggacattccagagaaaagacgggaac
agcgggagggtaggaaacctgatgctgggagacgaaacaggtacgctcagggtaacactc
tgggatgacaaaactgattttttaagccaggttgaatatggggatagtatagagctgatt
aatgcttatgcccgcgaaaatgcctttagccagaaagtagagttgcaggtaggaaacagg
agtataatcaggaaaagtgaaaagaaaattgaatacgaagaagaatttactcctattgat
gatataaaagctgatatgaataatataaatatctcaggaaggatccttgatatctcggaa
gtcaggactttcgagaaaaaagatggatccactgggagagtaggaaatgtccttctgggc
gattctacaggcaaaataagactgacgctatgggatgaaaaaactgatattcttgaagaa
attgactttgatgaaacagttgaagtccttaacgcttattcgcgggaaaatactttcagc
cagcaggttgaactcaacctgggagccagaggaataattcagagaagcgaaaagaaggtc
gagtacagggaaaaatttaccgatatagccgatatcatccccggagaaagttattctata
cagggaaaagttgccgagattggagagctcagagaatttgaaaaagaagacggaaccgaa
aatgttgttgcaaatctccagcttaaagacgatacaggcagcatccgactgacactctgg
ggagaacaggcatatgtgatagaagaccttgacatagattccgaaatccagatcatcgat
gcttatgccaggtacgggctgaacgaagaaatagaactgagtgttggaaacaggagtaga
gtgattatcctctga
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