KEGG   Methanosarcina mazei Go1: MM_1426
Entry
MM_1426           CDS       T00082                                 
Name
(GenBank) replication factor C subunit
  KO
K04801  replication factor C small subunit
Organism
mma  Methanosarcina mazei Go1
Pathway
mma03030  DNA replication
Brite
KEGG Orthology (KO) [BR:mma00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    MM_1426
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:mma03032]
    MM_1426
DNA replication proteins [BR:mma03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (archaeal)
    RFC (replication factor C)
     MM_1426
SSDB
Motif
Pfam: Rep_fac_C AAA DNA_pol3_delta2 AAA_22 AAA_14 ATPase_2 AAA_24 RuvB_N AAA_assoc_2 AAA_2 Rad17 AAA_16 TIP49 Sigma54_activ_2 RNA_helicase AAA_25 nSTAND3 RCF1-5-like_lid
Other DBs
NCBI-ProteinID: AAM31122
UniProt: Q8PWZ6
LinkDB
Position
1708793..1709818
AA seq 341 aa
MQDLWTLKYRADTLERLLGNEHAVKTLSELVQSRTLPHLIFYGPENSGKTTAALALARQL
YGDTWKNNFAYFNASDFFNQGKRYLVRDRRFVRFIGTDDPKKIYKSVIDIFKEIINEYAG
MAPLDADYKLIYIDNAESLSSDAQHALRRIMEKYSATCRFILSTTRPSKLISPLRSRGLQ
VFFAYVSDSLVKPHLERIALSEDLELSDGALDAILYLSKGNIARAVQTLQLAALKAESAE
ITEEIVFEATMKGRDETVDSLLEAALAGDFPRGRQLIDEMIIEKGLSGTDILEGLSEALI
DSGERDKDVARLIIEISDADSRLTDATSERIQLEKLISTFS
NT seq 1026 nt   +upstreamnt  +downstreamnt
atgcaggatctctggactctaaaatacagggcagacactcttgaaaggctgctcggtaac
gaacatgccgtgaaaacgctttccgaactggtccagtccaggaccctgccccatctcatt
ttttacggccctgaaaattcgggaaaaacaacggctgctcttgctcttgctaggcagctc
tatggagatacatggaaaaacaactttgcatattttaacgcttcggattttttcaaccag
ggaaaacgttatcttgtgcgggacaggcgttttgtccgttttatagggactgatgacccg
aaaaaaatctacaaaagcgtgatcgatatttttaaggaaatcattaacgagtatgccgga
atggcgcctctagacgctgattataagcttatttatatcgataatgcggaatctcttagt
tcggatgcacagcacgccctgaggcgaatcatggaaaagtacagtgcaacctgcaggttt
atcctttccactacaagaccttcaaaactcatttctcctctccgctcaagaggccttcag
gtcttttttgcctatgtttcggattccctcgtgaagccccatctcgagaggatcgccctt
tccgaggacctggagctttcagatggggcgcttgatgcgatcctttatctttctaaggga
aatattgcaagagctgttcagactctgcagctcgctgcccttaaagctgaaagcgctgaa
attacggaagagatcgtctttgaagctaccatgaaaggcagggacgaaactgtagattcg
ttgcttgaggctgcacttgcaggcgacttccccagagggcgccagctcatagatgaaatg
ataattgaaaaagggctttcagggactgatatcctcgaaggtctttccgaagcccttatc
gattctggagaacgcgataaggatgtcgcacgtcttattatagaaatatcagatgccgat
tcaaggcttacagatgccaccagtgagagaatccagctcgaaaagctgatttccacattc
tcctga

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