Methanosarcina mazei Go1: MM_1587
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Entry
MM_1587 CDS
T00082
Name
(GenBank) DNA repair helicase
KO
K10844
DNA excision repair protein ERCC-2 [EC:
5.6.2.3
]
Organism
mma
Methanosarcina mazei Go1
Pathway
mma03022
Basal transcription factors
mma03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
mma00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
MM_1587
09124 Replication and repair
03420 Nucleotide excision repair
MM_1587
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mma03021
]
MM_1587
03036 Chromosome and associated proteins [BR:
mma03036
]
MM_1587
03400 DNA repair and recombination proteins [BR:
mma03400
]
MM_1587
Enzymes [BR:
mma01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
MM_1587
Transcription machinery [BR:
mma03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
MM_1587
Chromosome and associated proteins [BR:
mma03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
MM_1587
DNA repair and recombination proteins [BR:
mma03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
MM_1587
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Helicase_C_2
DEAD_2
ResIII
DEAD
Zot
PhoH
HBB
nSTAND3
ATPase
Sigma54_activat
AAA_34
Motif
Other DBs
NCBI-ProteinID:
AAM31283
UniProt:
Q8PWJ8
LinkDB
All DBs
Position
1886322..1888661
Genome browser
AA seq
779 aa
AA seq
DB search
MMQKNGYMRYFTKKSCYPNQSEAMDKIHSALQNEKIVLFEGACGTGKTLSALAPALHAGK
KLNKVVIIVTNVHQQMVQFINEARDINRDNSIKTIVFKGKASMCPDNLDYEECRLKGENT
YDLLDFEREVSSKEKELKDAFEKHKKSKDPALYILRNELEKELDEARKKAQSLRNHSCSR
LYEVLKFESSEFSSWLFSDVRSPEEIMEYAEDRGMCGYELLKKELKNTELLICNFHHVLS
ADIFMTLLKWLERDPEDVILIFDEAHNIEASARSHSSIMLSELTVEKALSEVGEIPEPES
SPVFGGGSFSGTGIPLDEDYASRIYARRLFSCLLTAIRDTYDSKLKFGERNRLGKHWQDI
QISDPYERHDVLKARFLRDAQKEGFADEETVLTRLREIGEFGGRLEEIYAENYKKGLLSV
PKRSQIRYVADFLSSYLVLSDRQNYYPILNMRRDFKSDRVVGRLELFTCIPKNVTQPLLD
SVYSAVLMSATLRPFEMVRSTLGISREVEEITYGTTFPQERRLTLAVSVPPLFAKNRDSP
ETLEGLREALLAATAASPGNVIIYFQSYAEALRYTKLLEPELSIPIFLDEVGVSAQEIRP
KFFKIGEQGGKAVLITYLWGTLSEGVDFRDSRGRTVIVVGVGYPALNDRIKAVESAYDTV
FGCGEGWEFAVQVPTIRKVRQAMGRVVRSPGDFGVRILLDARYQGSQVRKLGKFSVFGYF
PPEESREFIDVAPKDVGSLVEEFFANTLPYNPEKIETEKKEPESPASGRLEFGSLAEKL
NT seq
2340 nt
NT seq
+upstream
nt +downstream
nt
atgatgcaaaagaatggatacatgcgatattttacaaaaaaaagctgctacccaaatcag
tcagaggctatggataaaattcattctgccctccagaatgagaaaatagtgctctttgaa
ggggcatgcggtacgggcaagactttaagtgcacttgctcctgcactgcatgcgggaaag
aagctcaataaggtcgtaattatagtcacgaatgtccaccagcagatggtccagttcata
aatgaagcaagagacatcaacagggacaacagcataaaaacaatcgtttttaaaggtaaa
gcttcgatgtgccctgataatcttgactacgaggaatgcaggctcaaaggggaaaacacc
tatgaccttcttgattttgaaagggaggtctcttcaaaggaaaaagaactcaaagacgcc
ttcgaaaaacacaagaaatcaaaagatcctgccctttacatcctcaggaacgagctcgaa
aaagaactcgatgaagcccgaaaaaaggctcagtccttaaggaaccattcctgctccagg
ctttatgaagtcctcaagttcgaaagcagcgagttttcttcctggctcttttcggacgtc
aggagtccggaagaaattatggagtatgcagaagaccggggaatgtgcgggtatgagctg
cttaaaaaggaacttaaaaatactgagctccttatctgtaatttccatcatgtattaagt
gctgacatcttcatgactctcctcaaatggcttgagagagaccctgaagacgtcatcctc
atctttgacgaagcccacaatatcgaggcttcagcacgttcccattcctcaataatgctt
tctgaactgaccgttgaaaaagccctttctgaagtgggagaaattcctgagcctgaaagc
tctcccgtattcgggggaggttcattctccggtacagggatccctcttgacgaagattac
gcttcaaggatttatgccagaaggctcttttcctgtcttcttaccgcaatcagggatact
tatgactcaaagctgaagttcggggaaaggaacaggcttggaaaacactggcaggatatc
cagataagcgacccctatgaacgccatgacgtcctgaaagcccgctttttgcgggacgca
cagaaggagggttttgcagacgaagaaacggttcttacaaggctgcgtgaaatcggggag
ttcggaggcaggcttgaagagatttatgctgagaactacaaaaaagggcttctttccgtg
cccaagcgttcccagatccgttatgttgcagatttcctttcttcttaccttgtgctttcg
gacaggcagaactattatccgatcctgaacatgcgcagggactttaaaagtgacagggtt
gtaggcaggcttgaactcttcacctgcatcccgaaaaatgtgacccagccattgcttgac
tccgtttattccgcggtgctaatgtctgccactctccgtcctttcgaaatggtcaggtcc
acactgggcattagccgggaagtggaggaaattacctatgggacaactttcccacaggaa
agaagactcactctcgcagtctcagttcctcccctctttgcaaaaaacagggacagccct
gagacccttgaaggtttgagagaggctcttcttgctgccactgctgcctcccccgggaat
gtaatcatttatttccagagctatgccgaagcactcagatatacgaaactccttgagcct
gaactctcaattcctattttccttgatgaggttggggtatcagctcaggagataaggccg
aagtttttcaaaataggggagcagggaggaaaagctgtgctcataacctacctctgggga
acattgagcgaaggagtagatttccgggactcccgcggcaggaccgtaattgtagtgggc
gtgggataccctgctctgaatgacaggataaaagctgtcgagtcggcatacgatactgtc
tttgggtgcggggaaggctgggaatttgcagtccaggtgcctacaataaggaaagtgagg
caggcaatgggaagggttgtccgctctccgggagattttggggtaaggattcttcttgac
gcccgctaccagggttctcaggtgcgaaaactggggaaattttctgtttttggatacttc
ccacctgaagaaagcagggaattcattgatgtagccccaaaagatgtaggaagcctggta
gaagagttcttcgcaaacacattgccttataatcccgaaaaaattgaaactgaaaaaaaa
gagccggaatctccggcttcaggccggctagagttcgggagccttgcagaaaaactctaa
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