Methanosarcina mazei Go1: MM_2184
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Entry
MM_2184 CDS
T00082
Name
(GenBank) TATA-box binding protein
KO
K03120
transcription initiation factor TFIID TATA-box-binding protein
Organism
mma
Methanosarcina mazei Go1
Pathway
mma03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
mma00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
MM_2184
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
mma03000
]
MM_2184
03021 Transcription machinery [BR:
mma03021
]
MM_2184
Transcription factors [BR:
mma03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
TATA-binding proteins
MM_2184
Transcription machinery [BR:
mma03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
MM_2184
RNA polymerase III system
TFIIIB
MM_2184
RNA polymerase I system
SL1/TIF-1B
MM_2184
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TBP
DUF3378
Motif
Other DBs
NCBI-ProteinID:
AAM31880
UniProt:
Q8PUZ4
LinkDB
All DBs
Position
complement(2590004..2590561)
Genome browser
AA seq
185 aa
AA seq
DB search
MESTITIENVVASTRLAEDFDLEKMMESGLEGAEYNKVKFPGLVYRINNPKAAFLIFTSG
KVVCTGSKSIGNAHAAIINLANTLKSICCEKIDLEPDVRVQNIVASADLKTNLNLNTIAI
AFGLENVEYEPEVFPGLIYRVEAPKVVVLVFSSGKLVITGGKCPEDCEEGLRIVKTEFDN
LGLLY
NT seq
558 nt
NT seq
+upstream
nt +downstream
nt
atggaatctacaataactatagagaacgtggtagcatctaccaggttggcagaagatttc
gaccttgaaaaaatgatggagtctgggttggaaggcgcagaatataacaaagtgaagttc
cctggtctcgtctacagaattaataaccccaaagctgcctttctaattttcacctctgga
aaagtggtatgcacaggatcaaagagcatcgggaacgctcatgcggccataatcaatctg
gctaacacgctcaaatccatatgttgcgagaaaatagatctcgaacctgatgttcgtgtt
cagaacattgtagctagtgctgatttaaaaacaaaccttaacctgaacaccattgctata
gcttttggtctggagaatgtcgaatacgagccagaggtatttccggggcttatttatagg
gtcgaggctcccaaggtagtagtgcttgtgttcagctctggcaagctggtaatcacaggt
ggaaaatgtccggaggattgtgaagagggtctgcggatcgtcaagacagagttcgacaac
ttaggacttctttattaa
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integrated database retrieval system
