Methanosarcina mazei Go1: MM_2420
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Entry
MM_2420 CDS
T00082
Name
(GenBank) DNA gyrase, subunit A
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
mma
Methanosarcina mazei Go1
Brite
KEGG Orthology (KO) [BR:
mma00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mma03032
]
MM_2420
03400 DNA repair and recombination proteins [BR:
mma03400
]
MM_2420
Enzymes [BR:
mma01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
MM_2420
DNA replication proteins [BR:
mma03032
]
Prokaryotic type
DNA Topoisomerases
MM_2420
DNA repair and recombination proteins [BR:
mma03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
MM_2420
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
Motif
Other DBs
NCBI-ProteinID:
AAM32116
UniProt:
Q8PUB5
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Position
2883276..2885978
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AA seq
900 aa
AA seq
DB search
MDTGPEEPEDEEPVRAGVTPILIDDEMKRSYINYAMSVIVGRALPDARDGLKPVHRRILF
SMNESGITHDKPYKKSARIVGDVLGKYHPHGDSAVYDTIVRMVQDFSLRYPLIDGQGNFG
SIDGDSAAAMRYTEVRMDRIAEEMLVDIEKETVPFIPNYDGSLKEPEVLPARLPNLLING
STGIAVGMATNMPPHNISEVIDGILMLIENPETQISELMTVIKGPDFPTGAHILGTAGIR
SAYMTGRGPIRMRAVAEIQELKKDRQQIIVTELPYQVNKAKLIENIAQLVREKVINGISD
LRDESDREGIRVVVELSRGVNPNVVLNQLYKHTQMATTFGVINLALVDGKPKELNLKQLL
EIYLEYRMEIIQKRTLYDLRKSEERAHILEGLRIALDNIDAVVALIKGSANADQAKQGLI
DNFALDEVQAKAILEMRLQRLTGLETRKILDELEALVKQIEELRKILASDELKYEIIRTE
LSELKDKYGDIRRTRIVHNTENVTDEDLIPEEDVVVTITNSGYIKRIPLDTYTMQRRGGR
GIIGMEMKEEDFVENLFISSTHNYILFFTNRGRLYWQKVYEIPEGSRQSRGKAIVNLLEL
QEGEMVNAMISVEEFAEDKYLFMATRAGTVKKTPLSEFRNPRRAGIIAVSLDEGDELVKV
LLTDGKQEIMMVSKKGKAIRFSEEDVRPMGRTARGVRGMTLEGPDDEVVSLDLVDETTTL
LTVTDNGFGKRTEYSQYPVHRRGGKGVITIVTNLRNGFVSNVKSVAEDDELMFTSAEGII
IRIPAKDISIQGRNTQGVRVMNIKSGDKVGGMARIKNGKEDEKLKLTALAKKAAKEKVPG
SESEEDESEDLDEFEGSDEFGEEPEKEEFEDSESEDSESEDSEEEEEEEEEEEEEKEEEY
NT seq
2703 nt
NT seq
+upstream
nt +downstream
nt
atggacaccggtcctgaagagcctgaagatgaggagcctgtaagagcaggagttactccc
atccttattgacgacgagatgaaacgctcttacatcaattatgcgatgagcgtaattgtc
ggaagggctctcccggatgcccgtgacggcttaaagcctgtccaccgcaggatccttttc
tccatgaatgagtcagggatcactcatgacaagccttacaaaaaatccgcacgtattgtg
ggagacgttcttggtaagtaccaccctcatggggattctgcagtttatgacactattgtg
cgcatggtccaggacttctctctcaggtaccctctgatcgacgggcagggtaacttcggg
tcaattgacggagactcggctgctgcgatgcgttacactgaagtccgtatggacaggatc
gcggaagagatgctggttgatattgagaaagaaaccgttcctttcattcctaactatgac
gggtccctgaaagagccggaagtccttccagccaggcttccaaacctccttataaatggt
tcaaccggcattgccgtcggaatggcaacaaacatgcctcctcacaatatcagcgaggtt
atcgacggaattctgatgcttatcgaaaaccccgaaacacagatttcggaactgatgacc
gttatcaagggtcctgacttccccacaggcgcacacatactcgggacagcgggtataagg
tctgcatacatgacaggcagaggccctataaggatgagggcagttgccgaaattcaggag
cttaaaaaagacaggcagcagattatagtaaccgaactcccttatcaggtaaacaaggca
aagttgattgaaaacatcgcccagcttgtaagggaaaaggtgattaacggaatttccgac
ctgcgtgatgagtctgacagggaagggatcagggttgtagtcgagctttcaagaggtgta
aaccccaacgtcgtcctgaaccagctttataaacacactcagatggcaaccacttttggt
gttatcaacctcgcccttgttgacggaaagcccaaagagctgaacctgaaacagcttctc
gagatctacctggaatacaggatggaaattatccagaagaggacactctatgatctgagg
aagagcgaagaaagggctcacatcctggaagggttaaggattgcccttgacaatatagat
gcagttgttgcccttattaagggttctgcaaacgccgatcaggcaaagcagggcttaata
gacaactttgctcttgacgaggtccaggcaaaagctatccttgagatgcgcctccagagg
cttaccggtcttgaaacccggaagatccttgatgaacttgaggctctcgtaaaacagatt
gaagaactgaggaagatcctggcaagtgatgaactgaagtacgaaattatcaggacggaa
ctttctgagctcaaggataaatacggggacatccgcaggacaaggattgtgcataacacg
gaaaatgtgactgatgaagaccttatccctgaagaagatgttgtagttacgatcacaaac
agcggctacataaagcgcattcctcttgacacctataccatgcagcgccgtggaggcaga
gggattatcggcatggaaatgaaggaggaagattttgttgaaaacctcttcatttcgtca
acccataactatatccttttcttcacaaacaggggcaggctctactggcagaaggtctat
gagatccccgagggctcccgccagtcgagaggcaaagccatagtcaacctgcttgagctt
caggaaggcgaaatggtcaatgccatgatttccgttgaagaatttgccgaagacaaatac
ctctttatggcaacaagggcagggacggtcaagaagactccactgtccgagttcaggaac
ccgagaagagcaggcatcattgcggtcagcctggacgaaggtgacgagcttgttaaagtc
ctccttaccgacggaaagcaggaaatcatgatggtctcgaaaaaaggcaaagccatccgc
ttctcagaagaagatgtccgcccgatgggcaggactgcaagaggagtccggggtatgacc
cttgaaggaccggatgacgaggtggtcagccttgacctggtggacgagaccacaactctc
cttacagtcaccgataacggcttcgggaaaaggacggaatactcgcagtaccctgtgcac
cgccgcggtggaaaaggcgtgatcacgatcgtcacaaacctcaggaacggatttgtctcc
aacgtcaaatcagttgctgaagacgatgaactcatgtttacgagtgcagaaggaatcatt
atccggatccccgcaaaagacatctccatccagggcagaaacacccagggtgtacgggtt
atgaacattaagtccggagacaaagtcggcggcatggcaaggatcaaaaacggaaaagaa
gacgaaaagctgaaactgaccgcccttgctaaaaaagcagcaaaagaaaaggtacctgga
tcagaatccgaagaagacgaatccgaagacctcgatgaattcgaaggctcagacgagttc
ggggaagaaccggaaaaggaagaattcgaagactcagaatccgaagactcagaatccgaa
gactcagaagaggaagaagaggaagaagaggaagaagaggaagaaaaggaagaggagtat
taa
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