Methanosarcina mazei Go1: MM_3076
Help
Entry
MM_3076 CDS
T00082
Name
(GenBank) DNA topoisomerase I
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
mma
Methanosarcina mazei Go1
Brite
KEGG Orthology (KO) [BR:
mma00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mma03032
]
MM_3076
03400 DNA repair and recombination proteins [BR:
mma03400
]
MM_3076
Enzymes [BR:
mma01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
MM_3076
DNA replication proteins [BR:
mma03032
]
Prokaryotic type
DNA Topoisomerases
MM_3076
DNA repair and recombination proteins [BR:
mma03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
MM_3076
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Zn_ribbon_Top1
Toprim
HHH_5
Cdd1
DUF4332
DNA_pol_lambd_f
Cas_TM1802
IMS_HHH_1
TfoX_C
SAM_BAF
RAD51D_N
Motif
Other DBs
NCBI-ProteinID:
AAM32772
UniProt:
Q8PSK3
LinkDB
All DBs
Position
3730798..3733056
Genome browser
AA seq
752 aa
AA seq
DB search
MHLIVTEKNIAARRIAAILAPKSPKKERVSGVDVYRYEIGSGENRQETAVVGLSGHIVGI
DFPKEYNNWQKVDARDLIDAEITTTPINRKIVTALKSLGKEADRVTIATDYDREGELIGV
EALNIIKKVNPKIPFDRVRYSAITPKAIEAAFSNPTNVDFNLADAGHSRQVIDLVWGAAL
TRYISLAAGRLGKMFLSVGRVQSPTLSLIVDREKERNIFVPTPYWEIHVELEDAAGETFS
AQHSTRRFLDKEEASKVFRKLGKKAELKEIEKGTKTDQPPTPFNTTGFISAANSIGLSPA
NAMRIAESLYTNGYISYPRTDNTVYPDTLDLKAQIEIFKEGPFKEYANTLLEKPELVPTR
GKKETTDHPPIFPASLAKESDLKEDEWKVYELVVRRFFATFAGPSIWETMRLKLDIEGEE
FRANGARLLEPGWRWYYPYNAPEDRLLPELKESDLLKVIKKEMLDKETQPPGRYGQGRLI
NIMEELGLGTKATRHEIISKLYSRAYIHGNPVQPTNTSFAVMDTLEKYSPTITKPDMTKL
LEENMDKIAEGKIKEEAVLEESREMLKQVFSELDKNRDNIIESLQAGLREDKIIGDCSLC
GNELMIRRSKRGSRFIGCSNYPNCTFSLPLPKSGQIIVTDKLCEAHGLHHIRIINQGKRA
WDLGCPQCNFIEWQKTQKEEQAQQPKKEKPKSIKDLEGVGKATAGKLEEAGITSVEALAE
ADPVELAKTIKTSVKKIKNWQTSCNGGAVEDL
NT seq
2259 nt
NT seq
+upstream
nt +downstream
nt
atgcatcttatcgtaacggaaaaaaatatagcggcaaggaggatagctgcgattctggct
cctaaaagtcctaaaaaggaaagagtcagtggagtagacgtataccggtacgagatcggt
tccggcgaaaacagacaggaaactgcagttgtggggctttccggccatattgtcgggata
gacttcccaaaggagtacaacaactggcagaaagtcgatgccagagaccttatagacgcc
gagattacaacaaccccgatcaaccggaagatagtgaccgctttaaagagccttggaaaa
gaagcggatagggtcactattgcaactgactacgaccgcgaaggagaactcataggggta
gaagctctgaatatcataaaaaaggttaacccgaaaattcctttcgacagggtccgttac
agtgcaataactccaaaagcaattgaagctgcattctcaaatcctacaaatgttgatttc
aaccttgcagatgcaggacattccaggcaggtaattgaccttgtctggggagctgccctt
accagatacatttcccttgcagcaggcaggctcggaaaaatgtttctttccgtgggaagg
gtccagtccccaaccctttctcttattgttgacagggagaaagagagaaatatatttgtc
ccaaccccttactgggaaatccacgtagaactcgaagacgctgcaggagagactttttca
gcccagcattctacccgccgttttctggataaagaggaagcttcaaaggtattcaggaaa
ctgggcaaaaaagcggaattaaaggaaatcgaaaagggaacaaagacagaccagcctccc
acaccttttaatactacgggctttatcagcgcggcaaactcaatcggtctcagccctgca
aacgccatgcgcatagccgaatccctttataccaacggttatatttcataccccaggaca
gacaacacggtttatcccgatactcttgacctgaaggctcaaatagagatattcaaagaa
ggaccttttaaagaatatgcaaatacacttcttgaaaagcccgaacttgttcctacccgt
ggtaaaaaagaaaccacagaccacccgcctatctttcctgcttcccttgcaaaggaatcc
gacctcaaagaagatgagtggaaagtttacgagcttgtagtcaggcgtttttttgcaacc
tttgccggaccgagcatatgggaaaccatgaggcttaaacttgatatcgaaggagaggag
ttcagggcaaacggggcaaggcttcttgaacccggatggcgctggtattatccgtacaat
gctcctgaggacaggctgctcccggaacttaaggaaagcgacttattaaaggtgataaag
aaagagatgctggataaagaaacccagcctccgggacgttacgggcagggcaggcttatc
aatataatggaagagctcgggctcgggacaaaagcaacccgccacgagattataagcaag
ctatattccagggcttacatccacggaaaccctgttcagcccactaatacctcttttgcc
gtaatggacactctggagaaatattcgcctactattacaaagccggatatgacaaagctg
cttgaagaaaatatggacaaaatagcagagggtaaaatcaaagaggaagctgtccttgaa
gagtcccgcgagatgctcaagcaggtcttttctgaactcgataaaaacagggataatatc
atagaatctttacaggcaggtctccgggaagataaaatcataggcgattgctctttatgc
ggaaacgaactcatgatccgcaggtcaaaaaggggaagccgtttcataggctgcagcaat
taccctaactgtactttctccctgcccctgccgaaaagcggacagatcatagtgaccgat
aagctctgcgaagctcacggcctgcaccatatccgcataatcaaccagggaaaaagagca
tgggaccttggatgtccccagtgcaatttcatagaatggcagaagacccagaaggaagag
caggcacagcagccgaaaaaagaaaagcccaaatccattaaagacctcgaaggcgtggga
aaagccaccgcaggaaaactggaagaagccggtatcacaagtgttgaagccctggcagaa
gcagaccctgtggaacttgcaaaaaccataaagacaagtgtaaagaaaatcaaaaactgg
cagacctcatgcaatggcggcgcagttgaggatttgtaa
DBGET
integrated database retrieval system
