Moritella marina: FR932_05610
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Entry
FR932_05610 CDS
T06214
Symbol
sbcB
Name
(GenBank) exodeoxyribonuclease I
KO
K01141
exodeoxyribonuclease I [EC:
3.1.11.1
]
Organism
mmaa
Moritella marina
Pathway
mmaa03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
mmaa00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
FR932_05610 (sbcB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mmaa03400
]
FR932_05610 (sbcB)
Enzymes [BR:
mmaa01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.1 exodeoxyribonuclease I
FR932_05610 (sbcB)
DNA repair and recombination proteins [BR:
mmaa03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
FR932_05610 (sbcB)
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
FR932_05610 (sbcB)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
FR932_05610 (sbcB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ExoI_SH3
ExoI_C
RNase_T
NirdL-like_HTH
HTH_24
Motif
Other DBs
NCBI-ProteinID:
QFI37341
UniProt:
A0A5J6WJH0
LinkDB
All DBs
Position
complement(1237359..1238801)
Genome browser
AA seq
480 aa
AA seq
DB search
MDNNSNKAAADQATFYWHDYETFGLSPSLDRPSQFAGIRTDMDFNVIGEPDMFYCRQSDD
YLPSPEAAMITGITPQKTQAEGVTEAEFSKRIEAQFSQKNTCIIGYNNIRFDDEVTRNIF
YRNFHDPYAHTWKDGNSRWDIIDLMRACYALRPEGIVWPENDDGLPSMRLELLTKANGIE
HANAHDATSDVYATIAMAKLVKDKQPKLFDFLFNLRNKRKVESLIDIINMTPLVHVSGMF
GADRGFTSWVVPLAWHPTNNNAVIVADLAQDITPLLELSSDELRDRLYTPRKELGDLAPI
PLKLIHINKCPVLAPAKTLLPENAERLGIDRNACLANLKRLKESKTLRENVVGVYQVERE
YPKTNNVDAMIYDGFFSAGDKANFEILRETAPEQLAGLKLKISDERFNEMFFRYRARNFP
HLLSMPEQQKWLNHCRTVLEDSAPAYFARLDALAIENSHDERKMKLLQQLYLYGQKIIGA
NT seq
1443 nt
NT seq
+upstream
nt +downstream
nt
atggataacaattctaataaagcagctgctgaccaagccactttttactggcacgattat
gaaactttcgggttaagcccatcacttgatcgcccttctcaatttgctggtattcgcacc
gacatggactttaatgtgatcggcgaacccgatatgttttattgccgtcaatctgatgat
tacctgccttcgccagaagctgccatgatcacgggaattacgccgcaaaagacccaagca
gaaggtgtcactgaagccgaattcagtaaacgaattgaagcgcagttcagccaaaaaaac
acctgtattatcggttacaacaacatccgctttgatgatgaagtcacacgtaatattttt
tatcgtaatttccacgacccgtatgcacatacatggaaagacggtaactcacgttgggat
atcatcgacttaatgcgcgcttgttatgcattacgtccagaagggattgtttggcctgaa
aatgatgatggtctgccaagcatgcgtcttgaattgttaaccaaagccaatggtatcgaa
catgccaatgcccatgatgcaacatcagacgtgtacgcaacgatcgcaatggcaaaactg
gttaaagataagcagccaaaattattcgatttcttatttaacttacgtaacaagcgtaaa
gttgaatcactgattgatatcatcaacatgacaccattagtacacgtgagtggcatgttt
ggtgcagatcgcggctttacaagttgggttgtgccactagcttggcatccaactaacaat
aatgccgtgatcgtcgctgatttagcgcaagacattactccgttgttagaactaagctca
gatgaattacgtgatcgcctgtatacgccaagaaaagaactgggtgatttagcccctatc
ccattaaagcttatccacataaataagtgcccagtattggcgccagcgaaaacattatta
cccgaaaatgccgaacgcttgggtatagatcgtaacgcctgtttagcaaatctaaaacgt
ttaaaagagagtaaaacactgcgtgaaaacgtggttggtgtgtatcaagtagaacgtgaa
tacccaaaaacgaataatgttgatgccatgatttatgatggtttctttagcgcaggtgac
aaagccaactttgagatcttacgtgaaactgcgccagagcaattagcaggactgaagctt
aaaatcagtgatgaacgttttaacgaaatgttcttccgctatcgtgcacgtaacttccca
catttactgtcgatgccagagcagcaaaaatggcttaatcattgccgcaccgtgctagaa
gacagtgcgccagcttactttgcccgcttagatgctctcgccattgaaaacagtcatgac
gaacgtaagatgaaactactacaacagttatacctttacggtcagaagatcattggtgcc
taa
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