Moritella marina: FR932_06275
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Entry
FR932_06275 CDS
T06214
Name
(GenBank) ribonuclease E
KO
K08300
ribonuclease E [EC:
3.1.26.12
]
Organism
mmaa
Moritella marina
Pathway
mmaa03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mmaa00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
FR932_06275
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mmaa03019
]
FR932_06275
03009 Ribosome biogenesis [BR:
mmaa03009
]
FR932_06275
Enzymes [BR:
mmaa01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.12 ribonuclease E
FR932_06275
Messenger RNA biogenesis [BR:
mmaa03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
FR932_06275
Ribosome biogenesis [BR:
mmaa03009
]
Prokaryotic type
rRNA processing factors
FR932_06275
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_E_G
RNase_E_G_Thio
S1
Extensin_1
Motif
Other DBs
NCBI-ProteinID:
QFI40225
UniProt:
A0A5J6WTE2
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All DBs
Position
complement(1391919..1395302)
Genome browser
AA seq
1127 aa
AA seq
DB search
MLINATQKEELRVALVDGQRLYDLDIESPGHEQKKANIYKGKITRVEPSLEAAFVDYGAD
RHGFLPLKEISRTYFKPGSGKQRGRPSIKDVVAEGTEVIVQIEKEERGNKGAALTTFVSL
AGSYLVLMPNNPRAGGISRRIEGDERTELKSALSTLELPEGMGLIVRTAGVGKSAEELEW
DLKVLLNHWGAIQDSAKDRQGTFLIHQESNVIARAIRDYLRRDIGEILIDHPKAFEEAKN
RIKLIRPDFIDRIKLYQGDVPLFNHYQIETQIESAFQREVRLPSGGSIVIDPTEALTSID
INSARATRGGDIEETALNTNLEAADEVARQLRLRDLGGLVVIDFIDMGPVKNQREVENCL
RDAVRQDRARIQLGRISRFGLMEMSRQRIRPSLGESSTHVCPRCDGQGTIRDNESLALSI
LRLIEEESLKENTNHIVAQVPVPVAAYLLNEKRNSILRLEKRYKVKSFIIPNENLQTPHF
EVSRVKADDDNSELSSTDLAKPREFNRYEPKVNNETVQPLVQQINATEAKTAKPSPAVKK
VTADTAPKAPAKAKVVKPAADKGSMFSRLGKAITGFFASDDKVVVKETVKDTSKKPVVDK
APTSRHNSDETRKPRNRRNRKPRNPENVDNKQQDANKKADVEAKQHNKFEARQKTSNQST
QEKQPVQSKNVKEAKEEGRSQNQAVLAERRQRRNMRKKVRVTNPEQEVATELKQTPADSH
KVKQDDKAQPAKRTRRSPRNARTNDAQKVEHAQVATTATVKAEVVKPVTTKVAKPVTTEA
TKPVTAEVTKPVTAEVTKPVTAKVTKPVTAEVTKPVTAEVTKPVTAKVTKPVTAEVTKPV
TAEVTKPVTAEVTKPVTAEVTKPVTAEVTKPVTAEVTKPVTAEVVKPVTVTAKATKPVMH
TAAAAKPAPVAETTTTVIAPTAKSSTERVKIETKSVSRQMHSAPAARPGATPAIETPVVE
TPVAETPVAETPVVETPVVETPVVETPVAETPVVETPVVETPVVETPVVETPVVETPVAE
TPVVETPVVETPVVETPVVETPVVTETPVAYKAIDVTPLAALQAEGTTSKKTNFTVKMAT
PQQVAPSKTNFVAKVGVVQRPLIDVAAGPGGSQFASSESKSPTTLAK
NT seq
3384 nt
NT seq
+upstream
nt +downstream
nt
atgttaattaatgcaactcaaaaagaagagttgcgcgttgcgctagtagatggacaacgc
ctttacgatttagatattgaaagcccaggtcacgaacaaaagaaagcgaacatctacaaa
ggtaaaattactcgtgtagaacctagtttagaagctgcttttgttgattatggtgcagac
cgtcacggtttccttcctcttaaagaaatctctcgcacttacttcaagccaggttcaggt
aagcaacgcggacgtccaagtatcaaggatgttgttgctgaaggtactgaagttattgta
cagattgaaaaagaagaacgtggtaataaaggtgcagcattaactacattcgttagttta
gcaggtagttaccttgttcttatgccaaacaaccctcgcgctggcggtatttctcgtcga
attgaaggtgatgagcgtactgaactaaaatctgcactttctacattagaattaccagaa
ggtatgggacttattgttcgtactgctggtgttggtaaatcggctgaagaactcgagtgg
gatcttaaagtacttttaaatcattggggagcaatccaagatagtgctaaagaccgccaa
ggtaccttcttaattcatcaagaaagtaacgtaattgcgcgtgctattcgtgattatctt
cgtcgtgatatcggtgagatccttatcgatcatccaaaagcatttgaagaagcaaaaaac
cgcatcaaattaatacgtcctgattttatcgaccgtattaaattgtatcaaggtgatgtg
cctttattcaatcattaccaaattgaaactcaaatcgaatctgcgttccaacgtgaagtt
cgcttaccttcaggtggttcaattgtaattgacccaactgaagcgttaacgtctatcgac
attaactcagcgcgcgctacacgtggtggtgatattgaagaaacagcattaaatactaac
ttagaagctgcagatgaagttgctcgtcaactacgtttacgcgatttaggtggccttgta
gttatcgattttatcgacatgggtccagttaaaaaccaacgtgaagtagaaaactgctta
cgtgatgcagtacgacaagatcgtgcacgcattcaattaggccgtatctctcgatttggt
ttaatggaaatgtctcgtcaacgtatccgcccttctctaggtgagtcaagcacgcacgtt
tgtccccgctgtgatggccaaggtactatccgtgataatgaatctttagcactttccatt
ctacgtttaatcgaagaagaatcgcttaaagaaaataccaaccacattgtagcgcaagta
ccagtacctgttgctgcttacttactaaatgaaaaacgtaattcaattcttcgtttagaa
aagcgttataaagttaaaagctttatcattccaaatgagaacttacaaacacctcatttt
gaagtatctcgtgttaaagcagatgacgacaactcagaattgtcgagtactgatttagct
aaaccacgtgaatttaatcgttatgagcctaaagtaaataacgaaactgttcagccgttg
gtacaacaaattaatgcaactgaagctaaaacagcaaaaccaagccctgctgtgaagaaa
gtgaccgctgacacggcaccgaaagcaccagctaaagctaaggtagttaagcccgcagca
gataaaggctctatgtttagccgcctcggtaaagcaattacagggttctttgccagcgat
gacaaagttgttgttaaagaaacagttaaagacacatctaaaaagccggttgtggataaa
gcgcctactagccgtcataatagtgatgaaacacgtaaaccacgtaatcgtcgcaatcgt
aagcctcgtaaccctgaaaatgttgataacaaacaacaagacgcaaataaaaaagcagat
gttgaagctaaacagcataacaagttcgaagcaagacaaaaaacatcgaatcaatcaact
caagaaaaacaacctgtacagtcgaaaaacgtaaaggaagcaaaagaagaaggccgttcg
caaaatcaagctgtattagctgaacgtcgtcaacgtcgtaacatgcgtaagaaagtacgt
gtaacgaatcccgaacaagaggttgctacagagttaaaacaaactcctgctgattcacac
aaagtgaaacaagacgataaggcacagccagctaagcgcactcgtcgtagccctagaaat
gctagaacgaatgatgctcaaaaagttgaacacgcccaagtagcaacaacagctacagta
aaagctgaagttgttaagccagtaacgactaaagtagctaaaccagtgacgactgaagca
accaagcctgtaactgctgaagtaactaaaccggtaactgctgaagtaactaaaccggta
acagctaaagtaaccaagcctgtaactgctgaagtaactaagcctgtaactgctgaagta
actaaaccggtaacagctaaagtaaccaagcctgtaactgctgaagtaactaagcctgta
actgctgaagtaactaagcctgtaactgctgaagtaactaagcctgtaactgctgaagta
actaagcctgtaactgctgaagtaactaagcctgtaactgctgaagtaactaagcctgta
actgctgaagtagttaagcctgtaacagtaacagcgaaagcaactaaacctgttatgcat
acagctgctgcagctaaacctgcgccagtagctgaaacaacgacaactgttattgcccct
acagcaaaatcatcgactgaacgtgtaaaaattgaaacgaaatcagtttcacgtcaaatg
cactcagctccagctgcacgccctggtgctactcctgcaattgaaacacctgttgttgaa
acacctgttgctgaaacacctgttgctgaaacacctgttgttgaaacacctgttgttgaa
acacctgttgttgaaacacctgttgctgaaacacctgttgttgaaacacctgttgttgaa
acacctgttgttgaaacacctgttgttgaaacacctgttgttgaaacacctgttgctgaa
acacctgttgttgaaacacctgttgttgaaacacctgttgttgaaacacctgttgttgaa
acacctgttgttactgaaacgccagtagcttacaaagctatcgacgtaacaccacttgca
gcgttacaagctgaaggtacaacatcgaagaaaactaacttcaccgttaagatggcaaca
cctcaacaggtagcgccttcaaaaactaactttgttgctaaagttggtgtcgttcaacgc
ccattaattgatgtggcagctggacctggtggtagtcaatttgcatcgtcagaaagcaaa
tcacctactacattagctaaataa
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