Mucilaginibacter mali: HQ865_04670
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Entry
HQ865_04670 CDS
T07211
Symbol
rpoN
Name
(GenBank) RNA polymerase factor sigma-54
KO
K03092
RNA polymerase sigma-54 factor
Organism
mmab
Mucilaginibacter mali
Pathway
mmab02020
Two-component system
mmab02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
mmab00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
HQ865_04670 (rpoN)
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
HQ865_04670 (rpoN)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mmab03021
]
HQ865_04670 (rpoN)
Transcription machinery [BR:
mmab03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
HQ865_04670 (rpoN)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_CBD
Sigma54_DBD
Sigma54_AID
LacI
MarR
SAM_1
HTH_IclR
Motif
Other DBs
NCBI-ProteinID:
QKJ29074
UniProt:
A0A7D4TME6
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All DBs
Position
1083003..1084478
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AA seq
491 aa
AA seq
DB search
MLKQNLQQKLLQKLSPQQIQFIKLLQVPTVSLDTRIKEELEENPALEDFSLTNMSEPEEQ
YPDRDPDEDNYSSDDDMGGSDEFNIDDYLQEDNVNDYGSRYDQNGDDDEDRKEIPIAVQS
SFFENLQSQLDLLPLTEKDFRIGQQIIGSLDDDGYLRRPITSLTDDLAFSQNVMAEDEEV
EEMLKVIQTFDPAGVGARTLQECLLIQLRKKDANDPVIKKAIIVVEDYLDEFTRKHYDKL
EKVLNMDSMELRAVVSEILKLNPKPGDSNEVNTKQMQVIPDFHITNNDGTLVLTLNAKNA
PELRVSRSYQDMFEHYDKASQKDKKLKEAVQFVKQKLDSAKWFIDAIKQRQQTLLKTMNA
IMHYQYDFFLTGDEKNLKPMILKDIADKIGMDISTVSRVANSKYVQTEYGTFLLKSFFSE
AIQTESGEEVSNKEVKKILEEHIGKEDKRHPLADEKLTEILKDAGYNIARRTVAKYREQM
NIPVARLRKEL
NT seq
1476 nt
NT seq
+upstream
nt +downstream
nt
atgctaaaacagaatcttcaacaaaaactattacaaaaattatctccgcagcaaattcag
tttattaagttgctgcaggtgccaaccgtatcgttagatacccgcattaaggaggaactg
gaggaaaaccccgcgcttgaagattttagcctgaccaatatgagcgagcccgaggagcaa
taccccgaccgcgaccccgacgaagataactacagcagcgacgacgatatggggggctct
gatgaatttaacatcgacgactacctgcaggaagataacgtgaacgattacggctcgcgc
tacgaccaaaacggagatgatgacgaagaccgtaaagagatccccattgccgttcagtca
tctttcttcgagaacctgcaatcgcagcttgacctgttaccgcttaccgaaaaagatttc
cgtatcgggcagcaaattataggtagtttggatgacgacggctacctgcgccgccccatc
acttcgcttaccgacgatctggccttttcgcaaaacgtgatggccgaggacgaggaggta
gaggagatgctgaaggtgatccaaactttcgacccggcgggcgttggcgcgcgcaccctg
caggagtgcctgctgatacaactgcgcaagaaagacgcgaacgatcctgttattaaaaaa
gccattattgtagttgaggattacctggatgagtttacccgcaagcactacgataaactg
gaaaaggtgcttaatatggactcgatggagttgcgcgccgtagtgagcgagatactgaag
ctaaaccccaagcccggtgacagcaacgaggtgaataccaaacaaatgcaggtgatcccc
gattttcatatcaccaataacgacggcacactggtattgacccttaacgctaaaaacgcg
cccgagctacgcgtaagccgttcgtaccaggatatgtttgagcattacgataaggcatcg
caaaaggataagaagctgaaagaagctgtgcagtttgtaaagcaaaagctcgattcggcc
aagtggtttatcgatgcgataaaacaacgccagcaaaccctgctgaaaaccatgaatgcc
attatgcattaccagtacgatttctttttgactggcgatgaaaagaacctgaagccgatg
atcctgaaagatatcgccgataaaattggtatggatatctctacggtatcgcgtgtggcc
aactccaaatatgtgcagaccgaatacggtaccttcctgctgaaatctttctttagcgaa
gccatccaaaccgaaagcggtgaggaagtatccaacaaagaggtgaagaagatacttgaa
gagcatattggcaaggaagataaacgccacccgctggccgacgaaaaactcaccgaaata
ttaaaggatgcaggctacaacatcgcccgccgcaccgtagccaaataccgcgaacagatg
aacataccggtggcgagacttagaaaggagttgtaa
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