Mucilaginibacter mali: HQ865_12385
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Entry
HQ865_12385 CDS
T07211
Symbol
rho
Name
(GenBank) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
mmab
Mucilaginibacter mali
Pathway
mmab03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mmab00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
HQ865_12385 (rho)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mmab03021
]
HQ865_12385 (rho)
03019 Messenger RNA biogenesis [BR:
mmab03019
]
HQ865_12385 (rho)
Transcription machinery [BR:
mmab03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
HQ865_12385 (rho)
Messenger RNA biogenesis [BR:
mmab03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
HQ865_12385 (rho)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rho_RNA_bind
ATP-synt_ab
Rho_N
AAA_25
NACHT
AAA_22
AAA
OB_RNB
Mor
Motif
Other DBs
NCBI-ProteinID:
QKJ30519
UniProt:
A0A7D4UDF9
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All DBs
Position
2912521..2914155
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AA seq
544 aa
AA seq
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MSDNTHELNDKLVSELRDMARSLGIAEADELRKPQLIVRIVEQQQLIEAARAQQSALASN
YAEITPDAPAAEAEEKPRKRTRVVKAKTPEPRVPLTDTNLFDQGDDDEPQRYNDDEAPVA
AEEPSQVITGDDDEPVVKTEERPAERPAKFERRNNQQSQQQQQQAKAPEVNLDFDNVIVN
EGVLEIMPDGYGFLRSSDYNYLTSPDDIYVSQSQIKLFGLKTGDTVRGSIRPPKEGEKYF
PLVRVEAINGRIPAEVRDRVPFDHLTPLFPSEKLNLFTDPGNNSTRIMDLFSPIGKGQRG
LIVAQPKTGKTMLLKDVANAIAKNHPEVYLIILLIDERPEEVTDMARSVRAEVIASTFDE
PAERHVKIANIVLEKAKRMVECGHDVVILLDSITRLARAYNTVAPASGKILSGGVDANAL
HKPKRFFGAARNIEDGGSLTIIATALTETGSKMDEVIFEEFKGTGNMELQLDRKLSNKRI
FPAIDLTASSTRRDDLLLERDTLQRIWILRNHLADMNSQESMEFLLTQMRGTRSNEEFLI
SMNS
NT seq
1635 nt
NT seq
+upstream
nt +downstream
nt
atgtctgataatactcatgaattgaacgataaactcgtttcagaactgcgtgatatggcc
agaagtttaggcattgccgaagctgatgagctgcgcaaaccccaattaattgtacgcatt
gttgaacagcagcagcttattgaagccgcccgcgcccagcaaagcgccctggccagcaat
tatgccgaaattaccccggatgcccctgctgccgaagccgaagaaaagccacgtaaaaga
acccgtgttgtaaaggcaaaaacaccagagccgcgtgtaccgcttaccgataccaacctg
tttgatcagggcgatgatgacgagccgcaaagatataatgacgacgaggcccctgtagcc
gccgaagaaccatcgcaggtaattaccggcgacgacgatgagccagttgtaaaaacagag
gaacgcccagccgagcgccctgctaaatttgagcgccgtaataaccagcaaagtcaacaa
cagcagcaacaggcgaaagcccccgaggttaatcttgattttgataacgttattgtaaac
gagggtgtgcttgaaattatgcctgatggctatggcttcctgcgctcatccgactataac
tacctgacctcgcccgatgatatttatgtatcgcaatcgcaaataaagctgttcggctta
aaaaccggcgataccgtgcgcggcagcatccgcccgccaaaagagggcgaaaaatatttc
ccgctggtacgtgtggaggccattaacggccgcatcccggccgaagtgcgcgaccgtgta
cctttcgatcacttaacgccgctgttcccatcggaaaaactgaacctgtttaccgatccg
ggcaataactcaacccgtataatggacctgttctcgccgatcggtaaaggtcagcgtggt
ttaattgtggcccagccaaaaaccggtaaaaccatgttgctgaaggatgtggccaacgct
atcgccaaaaaccaccctgaagtttacctgatcatcctgctgattgacgaacgccctgaa
gaggttaccgatatggcccgcagcgtgcgcgccgaagttatcgcgtcgacctttgacgaa
ccggccgagcgccacgtaaaaatcgccaacattgtattggaaaaagctaagcgcatggta
gagtgcggacatgatgtggtgatcctgttagactcgatcacccgtttggcccgtgcttat
aacaccgttgcccctgcttcgggtaagatcttatctggtggtgtggatgctaacgcgctg
cacaaacctaagcgtttctttggcgctgcccgtaatattgaggatggcggctcgctgacc
atcattgctacagcgctgactgaaaccgggtcgaagatggacgaagtgatctttgaagaa
tttaaaggtaccggtaacatggagttgcagcttgatcgtaaactatctaacaaacgtatc
ttccctgctatcgaccttaccgcttcgagcacccgccgcgacgacttgctgcttgagcgt
gatacgctgcaacgtatctggatactgcgtaaccacctggccgatatgaactcgcaggaa
tcgatggagttcttgctgacgcagatgagaggtacccgttcaaacgaggaattcctgatc
tcgatgaactcgtaa
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