Mucilaginibacter mali: HQ865_16515
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Entry
HQ865_16515 CDS
T07211
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
mmab
Mucilaginibacter mali
Pathway
mmab03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
mmab00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
HQ865_16515
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mmab03021
]
HQ865_16515
03400 DNA repair and recombination proteins [BR:
mmab03400
]
HQ865_16515
Enzymes [BR:
mmab01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
HQ865_16515
Transcription machinery [BR:
mmab03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
HQ865_16515
DNA repair and recombination proteins [BR:
mmab03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
HQ865_16515
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_L
RNA_pol_A_CTD
RNA_pol_L_2
RAD51D_N
HHH_5
Motif
Other DBs
NCBI-ProteinID:
QKJ31294
UniProt:
A0A7D4TQD5
LinkDB
All DBs
Position
complement(3974008..3975000)
Genome browser
AA seq
330 aa
AA seq
DB search
MAILAFQKPDKVIMQKSTDFEGTFEFRPLEPGFGVTIGNALRRILLSSLEGYAITSVRFS
GVTHEFSTIKGVVEDVTEIILNLKQVRLKKTGESGDTEKIFVIINGQDAFKAGDITKFSN
NFTILNPDLVICNMDSSVTLEIELTVNKGRGYIASEENKNPDAAVGVIAIDSIYTPMKNV
KYTIENYRVEQKTDYEKLVLDIATDGSIHPEDALKEAAKILIQHFMLFSDENMMLEAQAK
EETKEVDEEILHMRKILKTELVDLDLSVRALNCLKAADIRSLADLVSYDVADMLKFRNFG
KKSLTEIQDLVKSKGLSFGMNLSKFKLDEE
NT seq
993 nt
NT seq
+upstream
nt +downstream
nt
atggcaatattagcatttcaaaaaccagacaaggttatcatgcagaagtcgaccgacttt
gagggcacgtttgaatttcgtccgttagaaccaggcttcggggtaactattggtaatgct
ttacgtcgtatcttactttcatcgcttgaaggttatgcgatcacttctgttcgtttttca
ggtgttacgcatgagttctctaccatcaaaggtgtggtggaagacgttaccgagatcatc
ctgaacctgaagcaagttcgcttgaaaaaaacaggcgaatcgggcgataccgaaaagata
tttgtaattatcaacggccaggatgccttcaaggctggtgatatcaccaaattctcgaac
aactttactattttaaatcccgacctggtgatctgcaacatggattcatcagttaccctg
gaaattgaattaacggttaataaaggccgtggttacattgccagcgaggaaaataaaaac
cctgacgcggctgtaggcgtaatcgctatcgattcgatctacaccccgatgaagaacgta
aaatacactatcgaaaactatcgtgtagagcaaaaaaccgactatgaaaaattagtactg
gatattgctaccgatggttcgatacaccctgaagatgcgctgaaggaagcagctaagatc
ctgatccagcactttatgctgttcagcgatgagaacatgatgctggaagcacaggctaaa
gaagagaccaaagaggttgatgaagagatcctgcacatgcgcaagatcctgaaaactgaa
ctggttgaccttgatctatcggtacgtgcccttaactgccttaaagctgccgacatccgc
agcctggccgacctggtatcgtacgatgttgccgacatgctgaaattccgcaacttcggt
aaaaaatcactgactgagatccaggacctggttaaatcaaaaggcttatcttttggtatg
aacctgtctaaatttaagttagacgaggaataa
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