Mucilaginibacter mali: HQ865_17215
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Entry
HQ865_17215 CDS
T07211
Name
(GenBank) ATP-dependent helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
mmab
Mucilaginibacter mali
Pathway
mmab03420
Nucleotide excision repair
mmab03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
mmab00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
HQ865_17215
03430 Mismatch repair
HQ865_17215
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mmab03400
]
HQ865_17215
Enzymes [BR:
mmab01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
HQ865_17215
DNA repair and recombination proteins [BR:
mmab03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
HQ865_17215
MMR (mismatch excision repair)
Other MMR factors
HQ865_17215
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
PDDEXK_1
AAA_19
UvrD_C_2
AAA_30
Dna2
Viral_helicase1
AAA_12
DUF3799
HTH_Tnp_1
DUF2800
EF-hand_6
VF530
AAA_11
Motif
Other DBs
NCBI-ProteinID:
QKJ31431
UniProt:
A0A7D4Q9L5
LinkDB
All DBs
Position
4115683..4118847
Genome browser
AA seq
1054 aa
AA seq
DB search
MQSAYQKYQEKFEQVLAGLNEQQLAAVNKMDGPVLVVAGPGTGKTQILAARIGKILIETD
AQPNEILCLTYTDAGAVAMRKRLFEFIGPDAYRIHIHTFHAFCNEVIQENLEYFGKLSLE
PLSDLESAMLFRELVDDFGKDHLLKRFTGDVYYDIPRLRSLFSTMKKENWSEEQIAEAVR
EYLQDLHLREGFYYKRPNASRGIKAGDPKQKEIDAAHESMSKLLAAVGEYRNYQAKMNSQ
SRYDYDDMIIWVLNAFRNNEEILRRYQERYQYVLVDEFQDTSGAQNELLKFIISYWETPN
VFVVGDDDQSIFRFQGANMKNILDFAGDYVATLKTIVLKHNYRSNQHILDISRSLIDNNN
ERLTTQLNLDKNLQASHPRFNKLAVEPLIREYANPDQEMVDVARQIEQLVNTGTPPGEIA
VIYRNHSQAEDLVYYLDSKKIAVNTRRRIDILTEPFGEKITNILRYLAAEMETPYSGDDK
LFEILHYDFFDIPPIDVAKASIAVATENYSTASKGLPKTSLRRYISEMRMPSQIGMFDAA
PNHEIKYLMRYIDDLLKTSVSETLQELFQQVINKMGILKYIMKQPDKGKYMQMLSNFFDF
LKGESRKNPEITLAEFIEIIDLMKKNGIRLDLHQLIYSDNGVNFLTAHGSKGLEYEHVFM
IGCNKRIWDSKGRNMGFSYPDTLMQAPANDISEKEEARRLFYVALTRAKQHLSISYSAMD
KNEKDQEASQFIGEILATTHLKLEHPKVDPDDMVDFFLTQYNEDDKPKVQLLDTAYINQL
LQNYTLSVTHLSNYLDCPLRFYFQCLIRVPSGKSPAATFGSAVHDALRKAFKKLKDNNDE
FLSANEFLQDFKAYIYRNRDAFTKDEFKRRVEYGEKILPVYYDLNTPYWNKVTLVELPIK
NLEIAGVPVKGNLDKVEFMGKDVTVVDYKTGKLKYAKDKFRRPDDELPNGGDYWRQAVFY
KLLIDHDRTKDWQVTGTVFDFIEPIAEGEYHKEKVVISPQDEETVKEQITETYRKIMAHD
FATGCGKKECDWCHFVRSNFEQPGKMMELAEDGE
NT seq
3165 nt
NT seq
+upstream
nt +downstream
nt
atgcagtctgcctaccaaaaataccaggagaaatttgaacaagtgttagccggtttaaac
gagcagcagttggccgccgttaataaaatggatggccctgtactggtagtggccgggccg
gggacgggtaaaacgcagatcttagccgcccgcattggcaagatactgatagaaaccgat
gcccagcccaacgagatcctttgccttacctataccgatgccggcgccgtggccatgcgt
aagcgcctgttcgagtttattggccccgatgcttaccgcatccacatccatacctttcac
gctttttgtaacgaggtgatccaggagaacctggaatacttcggcaaactgagtctggag
ccgctgtccgacctggaatcggctatgctgtttcgcgaactggtggacgattttggcaaa
gaccacctgctgaagcgttttaccggcgatgtttattacgatatcccaaggttgcgttcg
ctgttctcgaccatgaagaaagagaactggagcgaggagcaaatagccgaagcggtacgc
gaatatttgcaggatctgcatctgcgcgagggcttttattataaacgacccaatgccagt
cgcggcataaaagccggcgacccgaagcaaaaggagatagacgcggcacacgagagcatg
agtaagctgttggccgccgtgggcgaataccggaactaccaggccaaaatgaacagtcaa
agccgttacgattacgacgacatgatcatctgggtgctgaacgctttccgtaataacgag
gagattttgcgccgctaccaggagcgctaccagtacgtgctggtagatgagtttcaggat
accagcggcgcgcaaaacgagttgctgaaattcatcatcagctattgggaaacgcccaat
gtgtttgtggtgggcgatgatgaccagtccattttccgtttccagggcgccaacatgaaa
aatattttggatttcgcgggcgattacgtggccacgctgaaaaccatcgtacttaagcat
aattaccgctccaaccagcatatactggatatatcgcgctcacttatcgataacaataac
gagcggctaaccacgcagcttaaccttgataaaaacctgcaggcatcgcacccgcgcttt
aacaaactggctgttgagccactgatacgcgaatacgccaaccccgaccaggaaatggtg
gacgtagcccggcaaatagagcaactggtgaataccggcacgcccccgggcgagatagcc
gtaatttaccgaaaccacagccaggccgaggatttggtgtattatcttgatagtaaaaaa
atagctgtaaatacccgtcgccgtattgatattttgacagagccattcggcgaaaagatc
accaatatcctgcgttacctcgccgccgaaatggagacgccttacagtggggatgataag
ctgttcgagatcttgcattacgatttcttcgacatcccacctatagatgtggctaaggcc
agcattgcggtggctaccgaaaattacagcacggccagcaagggcttgcctaaaacatcg
ctgcggcgttacatcagcgagatgcgcatgccatcgcaaattggcatgtttgatgccgcg
cccaatcacgaaatcaaatacctgatgcgctatatcgacgatttgctgaaaacatcggta
agcgaaaccctgcaggagttgtttcagcaggtgatcaacaaaatgggcatcctgaaatat
attatgaagcagcccgataagggtaagtatatgcagatgctcagcaacttcttcgatttt
ttgaaaggcgaaagccgcaagaacccggagatcacactggcggagtttatcgaaattatc
gacctgatgaagaagaacggcatccggctggatctgcatcaactgatctattcggacaat
ggggttaacttcctcaccgcgcacggatcaaagggtttggagtatgagcatgtatttatg
attggctgcaacaaaaggatttgggacagcaaaggccgcaatatgggcttcagttatccc
gatacgctgatgcaggccccggctaatgatatctctgaaaaagaggaggcccgccgcctg
ttttacgtggcgcttacccgcgccaagcagcacctgtccatctcttattcggccatggat
aagaacgaaaaggaccaggaggcatcgcaatttatcggcgagatattggccaccacccac
ctgaagctagagcatccgaaggtagatccggacgatatggtcgactttttcctaacccag
tataacgaggatgataagcctaaagtgcaactgctggataccgcctacatcaaccaattg
ctgcaaaactacacgctgtcggtaacccaccttagtaattatttggattgcccgcttcgg
ttttacttccagtgcttgatcagggtgccatcgggtaaaagtccggcggctacttttggt
tcggcggtgcacgatgctttacgtaaggcctttaaaaaactgaaggataataacgatgag
ttcctgtcggcaaatgagtttttgcaggattttaaggcgtacatctatcgcaaccgcgat
gcctttaccaaggatgaatttaagcgccgggtggaatatggcgaaaagatcttaccggtt
tattacgacctgaacaccccgtactggaacaaggtaacgctggtggaactacctattaaa
aacctggaaatagccggtgtacccgtaaaagggaacctggataaggtggagtttatgggt
aaagacgtaaccgtggttgactataaaaccggtaagctgaaatacgccaaggataaattc
cgccggccggatgatgaattacctaacggtggcgattactggcgccaggcggtattttat
aagttgctgatagaccacgaccgcaccaaggactggcaggtaaccggcaccgtgttcgat
tttatagaacccattgccgagggcgaatatcacaaagaaaaggtggtgatcagtccgcag
gatgaagagacggtaaaagaacagatcaccgaaacctaccgcaaaattatggcgcacgat
tttgccaccggctgcggcaaaaaagaatgcgactggtgccactttgtgcgcagcaatttt
gaacagccaggcaaaatgatggagctggcggaggatggggaataa
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