Methanosarcina mazei C16: MSMAC_0280
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Entry
MSMAC_0280 CDS
T04626
Name
(GenBank) TATA-box binding protein
KO
K03120
transcription initiation factor TFIID TATA-box-binding protein
Organism
mmac
Methanosarcina mazei C16
Pathway
mmac03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
mmac00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
MSMAC_0280
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
mmac03000
]
MSMAC_0280
03021 Transcription machinery [BR:
mmac03021
]
MSMAC_0280
Transcription factors [BR:
mmac03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
TATA-binding proteins
MSMAC_0280
Transcription machinery [BR:
mmac03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
MSMAC_0280
RNA polymerase III system
TFIIIB
MSMAC_0280
RNA polymerase I system
SL1/TIF-1B
MSMAC_0280
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TBP
DUF3378
RTT107_BRCT_5
Motif
Other DBs
NCBI-ProteinID:
AKB70170
LinkDB
All DBs
Position
363540..364091
Genome browser
AA seq
183 aa
AA seq
DB search
MSESSIKIENVVASTKLAEEFDLTVIESEFEGAEYNKQKFPGLVYRVSDPKAAFLVFTSG
KVVCTGTKNVADVHTVVGNLAKKLNSIGIKTIENPQITVQNIVASADLHTILNLNAIAIG
LGLENIEYETEQFPGLVYRIDEPKVVVLIFSSGKLVVAGGKSPEDCERSVEVVRQQLDSM
GLL
NT seq
552 nt
NT seq
+upstream
nt +downstream
nt
atgagcgaatctagtatcaagatcgaaaatgtggttgcatccaccaaactcgctgaagaa
ttcgacttaactgttatcgaatccgagttcgaaggagcagagtacaacaagcagaagttc
cccgggctcgtttacagggtttcagatcctaaagctgcattcctggtctttacttctggc
aaggttgtctgtacagggacgaaaaatgttgccgatgtacacacagttgtaggtaatttg
gcgaaaaagctgaacagtatagggattaagaccatagagaaccctcagattactgtccag
aacattgttgcttccgcagacctgcatactattttgaaccttaatgcaattgcaataggg
cttggacttgaaaacattgaatacgagactgagcagtttcctggtcttgtatacagaatt
gatgagcccaaagtagttgtgcttatcttcagctccggaaaactggtagttgcaggcggt
aagagccctgaagattgcgagaggagcgttgaagtagtccgccagcagctcgacagtatg
gggcttttataa
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integrated database retrieval system
