KEGG   Methanosarcina mazei C16: MSMAC_0418
Entry
MSMAC_0418        CDS       T04626                                 
Name
(GenBank) Flap structure-specific endonuclease
  KO
K04799  flap endonuclease-1 [EC:3.1.-.-]
Organism
mmac  Methanosarcina mazei C16
Pathway
mmac03030  DNA replication
mmac03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:mmac00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    MSMAC_0418
   03410 Base excision repair
    MSMAC_0418
   03450 Non-homologous end-joining
    MSMAC_0418
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:mmac03032]
    MSMAC_0418
   03400 DNA repair and recombination proteins [BR:mmac03400]
    MSMAC_0418
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:mmac04147]
    MSMAC_0418
DNA replication proteins [BR:mmac03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   Other elongation factors
    MSMAC_0418
 Prokaryotic type
   Elongation factors (archaeal)
    Other elongation factors
     MSMAC_0418
DNA repair and recombination proteins [BR:mmac03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     MSMAC_0418
Exosome [BR:mmac04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   MSMAC_0418
SSDB
Motif
Pfam: XPG_I XPG_N 5_3_exonuc HHH_5
Other DBs
NCBI-ProteinID: AKB70308
UniProt: A0A0E3RWU1
LinkDB
Position
517499..518515
AA seq 338 aa
MGTDIGDLLQKRKIELSDLSNRVVAVDAFNTLHQFLSIIRQRDGSPLVNSQGKVTSHLSG
LLYRTASLVEAGIKPVFVFDGKPPEMKTGTLNRRKEIRESSKEKWENAKAEGNLEAAYKY
AQASSKVDQDIIEDSKYLLDIMGIPWIQAPCEGEAQAAHMVLKKDADCVASQDYDSFLFG
APTVVRNLAATGKRKLPGKNVYVDVELEMIELEETLDSLGINRDQLIDIAICVGTDYNKG
LEKVGPKTALKLIKKHGNIHAVLREKGMEIEALDSIKELFTHPDVTDDYEIKWGKPDSEK
LINFLCDENDFSEDRVVKAADRLKAASGARQQTLDQWF
NT seq 1017 nt   +upstreamnt  +downstreamnt
atgggtacggatataggagatctgctccagaaaagaaaaatagaactttctgacctttca
aaccgggtggttgcagttgacgcatttaacaccctgcaccagtttttgagcattatccgc
cagagagatggaagccctctggttaattcacaggggaaagtaacttctcatctctcaggg
cttctctatcgcacagccagtctggtagaggcaggtatcaagcctgttttcgtttttgac
ggcaagcctcctgaaatgaaaacaggaactctgaatcgaaggaaagaaatcagggaatct
tcaaaggaaaagtgggagaatgcaaaagcagagggcaaccttgaagctgcatataagtac
gcccaggcttcttcaaaagttgaccaggacattattgaggactccaagtatctcctcgat
attatgggcatcccctggatacaggctccatgtgaaggcgaggcgcaggctgcgcatatg
gttcttaaaaaagatgctgactgtgttgcttcccaggactacgattctttcctcttcgga
gccccgactgtagtccgtaatctggctgccaccggcaaacgcaagctccccgggaaaaat
gtgtatgttgatgttgaacttgaaatgattgagcttgaggaaaccctggattccctggga
atcaacagagaccagcttattgatatagcaatctgtgtgggcacggattataataaagga
ttggaaaaagtgggtcccaaaacagccctcaagctgattaaaaagcacggaaacattcat
gccgtgctccgggaaaaaggtatggagattgaagctctggacagcataaaggaacttttt
acccatcctgatgttacggatgactatgaaatcaaatggggaaaacccgactctgaaaaa
ctcattaatttcctctgtgacgagaacgatttctctgaagacagggtggtaaaagccgca
gatcgccttaaagcggcttcaggggcaagacagcaaactcttgaccagtggttctga

DBGET integrated database retrieval system