Methanosarcina mazei C16: MSMAC_0472
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Entry
MSMAC_0472 CDS
T04626
Name
(GenBank) Deoxyribodipyrimidine photolyase, type II
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
mmac
Methanosarcina mazei C16
Brite
KEGG Orthology (KO) [BR:
mmac00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mmac03400
]
MSMAC_0472
Enzymes [BR:
mmac01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
MSMAC_0472
DNA repair and recombination proteins [BR:
mmac03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
MSMAC_0472
Prokaryotic type
MSMAC_0472
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_photolyase
FAD_binding_7
Motif
Other DBs
NCBI-ProteinID:
AKB70362
UniProt:
A0A0E3RVU1
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All DBs
Position
586576..587964
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AA seq
462 aa
AA seq
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MNPKRIRALKSGKQGDGPVVYWMSRDQRAEDNWALLFSRAIAKEANVPVVVVFCLTDEFL
EAGIRQYEFMLKGLQELEVSLSRKKIPSFFLRGDPGEKISRFVKDYNAGTLVTDFSPLRI
KNQWIEKVISGISIPFFEVDAHNVVPCWEASQKHEYAAHTFRPKLYALLPEFLEEFPELE
PNSVTPELSAGAGMVETLSDVLETGVKALLPERALLKNKDPLFEPWHFEPGEKAAKKVME
SFIADRLDSYGALRNDPTKNMLSNLSPYLHFGQISSQRVVLEVEKAESNPGSKKAFLDEI
LIWKEISDNFCYYNPGYDGFESFPSWAKESLNAHRNDVRSHIYTLEEFEAGKTHDPLWNA
SQMELLSTGKMHGYMRMYWAKKILEWSESPEKALEIAICLNDRYELDGRDPNGYAGIAWS
IGGVHDRAWGEREVTGKIRYMSYEGCKRKFDVKLYIEKYSAL
NT seq
1389 nt
NT seq
+upstream
nt +downstream
nt
atgaatccgaaacgtatcagggctcttaaatcagggaaacagggggacggacctgttgtt
tactggatgagtcgggaccagagggctgaagataattgggctcttctcttttcacgggca
atagcaaaagaagctaatgtgcctgtagtagtggttttttgcctgacggatgagttttta
gaggctggtatcaggcagtatgaattcatgctcaaagggcttcaggaacttgaggtttca
ctttcccgtaaaaagattccgtctttcttcctgagaggggatcccggagaaaaaatttcc
cggtttgtaaaagactataatgccgggactcttgttacggacttcagcccgctccgcata
aaaaaccagtggatagaaaaagttatttccggcatttcaatcccgttttttgaggttgac
gcccataatgttgttccctgctgggaggcttctcaaaaacatgagtatgcagcgcatact
ttccgcccgaaactctatgctcttcttccagagtttcttgaagaattccctgaacttgag
cctaattctgtaactcccgagctttcagccggtgccggcatggtggagactttatcggac
gtactggaaaccggagttaaagcccttcttcctgagagagccttacttaaaaataaggat
cctctttttgaaccttggcacttcgagcccggagaaaaagctgcaaaaaaggtaatggag
agttttattgcagacaggcttgattcgtacggggcgctgagaaatgacccgacaaaaaat
atgctttcaaatctctcgccctatcttcatttcgggcagatatcttcccagagggttgtg
cttgaagtggaaaaggcagaaagtaaccccgggtcaaagaaagcttttctggatgagatt
cttatatggaaggagatttcggacaatttctgttattataacccaggatacgatgggttt
gaaagctttccatcctgggcaaaggaatctttaaacgcccacaggaatgatgtgaggagt
catatctacacccttgaagagttcgaagcaggaaaaacacatgacccactctggaacgcg
agtcagatggaacttctcagtacagggaaaatgcacggttacatgcgcatgtactgggca
aaaaaaattctggaatggagcgaatctcccgaaaaagcccttgaaattgcaatctgcctg
aacgacaggtatgaacttgacggaagagaccccaatggatatgccggaattgcctggagt
atcggaggagtccatgacagggcatggggggagagagaagttacaggaaaaatcagatat
atgagttatgaaggctgcaaaagaaaatttgacgttaaattatatattgaaaaatattca
gctttgtag
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