Methanosarcina mazei C16: MSMAC_0833
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Entry
MSMAC_0833 CDS
T04626
Name
(GenBank) Endonuclease IV
KO
K01151
deoxyribonuclease IV [EC:
3.1.21.2
]
Organism
mmac
Methanosarcina mazei C16
Pathway
mmac03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
mmac00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
MSMAC_0833
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mmac03400
]
MSMAC_0833
Enzymes [BR:
mmac01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.21 Endodeoxyribonucleases producing 5'-phosphomonoesters
3.1.21.2 deoxyribonuclease IV
MSMAC_0833
DNA repair and recombination proteins [BR:
mmac03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
MSMAC_0833
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AP_endonuc_2
DUF4400
Motif
Other DBs
NCBI-ProteinID:
AKB70723
UniProt:
A0A0E3RXS4
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All DBs
Position
complement(1003988..1004821)
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AA seq
277 aa
AA seq
DB search
MLPEKLIFGTAGIPRSTKASNSVAGIARVRELELDCMELEFVQGVRMSEKGAVNVLEAAR
RENIALSVHAPYYINLNSSEEEKLKASMERIYQAARIGSLCGAESIVMHAAFYQKSSREA
AYQNVSKALSELAGRLRDESIDAVLRPETMGKRAQFGTLDEVLSLSEEIEGVMPCLDFSH
LHAREGKENSYPEFTSILSKVEEALGKEGLENMHMHVSGIEYDRNGEKKHLTLKESDFNY
PELLKALKEFEVKGLVICESPIMEEDALLLKRTYAEL
NT seq
834 nt
NT seq
+upstream
nt +downstream
nt
atgttacctgaaaaacttatttttgggactgcaggaattcccagaagcacgaaagccagc
aacagcgttgcaggaatagctagggtcagagaactggagcttgactgcatggaacttgag
ttcgtgcagggagtacgtatgagtgaaaaaggggcagtaaacgtcctggaagcagccaga
agagaaaatatagccctgagcgtacatgcaccttactatatcaacctgaactcttctgaa
gaggaaaaattaaaagccagcatggaaaggatatatcaggctgcaaggataggcagcctc
tgtggagcagagtcgatagttatgcacgcagccttttaccagaagagcagcagggaagcc
gcttatcagaacgtctcaaaagccctcagtgagcttgcaggacggctccgggatgaaagc
atagatgcagtccttcgccctgagaccatgggcaaacgtgctcagttcggaacccttgat
gaggtgctttctttaagcgaagaaatcgaaggggtcatgccctgccttgacttttcccat
ctgcacgcaagggaaggaaaggaaaactcctatcccgaatttacgtcaatcctctcgaaa
gtggaggaagcccttggaaaagaagggcttgaaaacatgcatatgcacgtatcaggaata
gaatacgacagaaacggggaaaaaaagcacctgacccttaaagaatccgattttaactat
cccgaacttctgaaagcccttaaagaatttgaagttaaagggcttgttatctgcgaaagc
ccaataatggaagaagatgcacttcttctgaaaaggacttacgcggaattataa
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