Methanosarcina mazei C16: MSMAC_0848
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Entry
MSMAC_0848 CDS
T04626
Name
(GenBank) HTH DNA-binding protein
KO
K07728
putative transcriptional regulator
Organism
mmac
Methanosarcina mazei C16
Brite
KEGG Orthology (KO) [BR:
mmac00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
mmac03000
]
MSMAC_0848
Transcription factors [BR:
mmac03000
]
Prokaryotic type
Helix-turn-helix
Other families
MSMAC_0848
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HTH_3
HTH_19
HTH_31
HTH_11
MerR
MerR_1
HTH_25
HTH_Crp_2
Motif
Other DBs
NCBI-ProteinID:
AKB70738
UniProt:
A0A0E3RXT6
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All DBs
Position
1019836..1020819
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AA seq
327 aa
AA seq
DB search
MTKEVLIHQIIDVLARAGFALSDRCNIRPRSFDVAARKDDTLLLCKVLFNIDGLNEETAR
EMKYLAEYLGGSAIVVGAKTRDQMLEDSVVYMRYDILALSVQTLYDYFVENIRPLVSAAP
GGLYVSIEGDLLKKARTTQSMSLGTLASMVGVSRRTISKYEEEGMDASIDVVLHLEDIFG
VELAKPIDILKSCGSRKPRKKAEPEKEEPKGKPGTLLPEDLILNTISMLGYDVLPTAQAP
FKAISRDKSSVILTGVSEFNTTVIKRAHLMSSISCITKTQSVFIINGRSKLKSVENTVLI
EKKELDTISDSQELLDFIEERKDTHEA
NT seq
984 nt
NT seq
+upstream
nt +downstream
nt
atgacaaaagaggttctcatacatcaaattattgatgtattggcacgtgcgggttttgca
ctctctgaccgctgtaatatacgcccgaggagctttgacgttgccgcacgaaaagatgat
acactattactttgcaaggttttatttaatattgacggcctgaacgaagaaacagcaagg
gagatgaaatatcttgctgagtatctgggaggttccgctatcgtggtcggagccaagaca
agggaccagatgcttgaagacagcgttgtctacatgcgctatgatatccttgccctcagc
gtccagaccctgtatgattactttgttgaaaatatcagacctctggtatcggcagcacct
ggagggctttatgtctcaatagagggagacctccttaagaaggcaagaaccacccagtcc
atgtccctcgggactctggcttctatggtgggggtttcaagaagaactatcagcaagtat
gaagaagaaggcatggacgcgtccattgacgtcgtgctccatcttgaggacattttcggg
gtagagctggcaaaacccatagatatcctgaagtcctgcgggagcagaaagccgaggaaa
aaagcagagcctgaaaaggaggagccaaaggggaaacccggaacgcttttgcccgaagac
cttatcttgaatacaatttcaatgctggggtatgatgtgctccctacagctcaggcacct
ttcaaagccatctccagggataagtcttcggttatccttacaggtgtgagcgaattcaat
acaaccgtaatcaagagggctcaccttatgagcagcatttcctgcattacgaaaacacag
tccgtgttcataattaacgggcgttccaaactgaaatccgttgaaaatacggtgcttata
gaaaagaaagaactagacactataagtgattctcaggaactcctcgattttatagaggaa
cgcaaggatactcatgaggcataa
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